Notothenia coriiceps (black rockcod): 104946351
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Entry
104946351 CDS
T04920
Name
(RefSeq) LOW QUALITY PROTEIN: protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ncc04054
]
104946351
Pattern recognition receptors [BR:
ncc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104946351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
AAA_33
LRR_12
Motif
Other DBs
NCBI-GeneID:
104946351
NCBI-ProteinID:
XP_010770472
UniProt:
A0A6I9N1L1
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MERRAHYDSILDRSKRITWQDDCYVDLQSTPCSVSSKAETEELGWIQKHQDQLQRFITTS
FLEEMMTHLGKMDVLNSAEETKVKEAGRLQDQVNMFTSIVSGKDSQGSDALRAFVQSSDS
QVAQLIINHESMVKEHKEALLRRYEQYRDRDSIICPKLNISSRTLLLVDGLSDIQQKEHD
LMQVGATRGRKRNHLRQLGLTKLLEPLTRVSLPPRVSLTVGVAGIGKTTWVRHFLRQWSQ
GAICTDVSFILPFTFCELNSLEKVSAERLVKMAFPHLTDPGLVLSSSCRTLLILDGLDEF
RCTLNFSDAAPCSDPKKEVSIDDLVTNIIRGNLLPDVAVWVTSRPGVASLIPGGLVDRVT
EIPGFSSKDIQLFLNHHFSERDFSSKIWAHLESNKILMVMCYIPCISWIVADTLMYIMQS
ETQESLPRTCTELYAHFCSMKAEVGEPRGREPVKMEQLHGTNRKLLGNLGRLAFYGLLKH
KYTFSEQDLRAYGIDLLLTQCSLGAGVLVREESALSTTYRFTHLTLQEFLAATFYHISSK
RALFDLFSESTMSWPKIGFQNHFKSAFQHSQQAEDGHLDVFVRFLTGLLCPAAIKPLAGL
LALGKDDGNQKAWAAGFLQSLLVSGGAVVSLRSVNLAYCLQELQHTELLRSVEEDLQLGS
LAGKLTRAHCVVLGYLLHVSAECSEQTNLTGSLNYATVKCLLPQLLYCSFLRLENNHFKD
DVMELLGSLLSAKDCHIQKISLAENAISNKGAKALSRALLVNRTLTSLNLRNNNIGSKGA
KFLAEALKMNQVLVSINFQNNSIEEEGAHALAEVLHCNRKLVSLNLRKNMVGAGGAKRIA
EALKTNRTLTKLILCSNQLGDKGTVALAEALTVNHTLLVLQLQSNSISNKGMTALTKALR
LNRGLVSLNLRENSIGVEGAKNMAQALHENNSLQDLDLTANLLHDEGVQAIAGAIKVNRG
LTSLHLQWNFIKCSATKALANALLTNATIQLLDLQENAIGNEGVIFLAEALKTNMSLRIL
CLQGVSASTSGALALAGALMRNQTLQTLE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagggcccactacgattctatcctggatcgaagcaaacgcatcacgtggcag
gacgactgctacgtggaccttcagtcgacaccctgctccgtctcttcaaaagcagaaaca
gaggaacttggctggatccaaaagcaccaagaccagctgcaacgcttcatcacaacctcc
ttcctggaggagatgatgacacacctgggaaagatggatgtgttgaattcagctgaagag
acgaaggtcaaggaggcgggccggctgcaggatcaggtcaacatgttcacatccatcgtc
tctggcaaggactctcaaggctctgacgctctgcgggccttcgttcagagctcagactct
caggtggcccagctcatcatcaaccacgaatccatggtgaaggagcacaaagaggcactc
ctccgacgatacgagcagtacagagaccgagattcaatcatctgccccaaactgaacatc
tcctccaggacattacttctggttgatggactttccgacatacagcagaaagaacacgac
ttaatgcaggtcggggcgactcgaggaaggaagagaaatcatctcagacagcttgggctg
accaaactcttggagcctttgacccgggttagtttacccccgcgggtctccctcacagtc
ggggtggctggtatcggcaagacaacctgggtccgacacttcctccgacagtggagccaa
ggagccatctgcaccgatgtgagcttcatcttgcctttcactttttgcgagctgaactcc
ctggagaaagtctctgctgagaggctggtgaaaatggcttttcctcatctaacggatccc
ggtctggtcctgagcagctcctgccgcacactgctcattctcgatggtttggacgaattt
cgctgcaccttaaatttctccgatgcagctccttgcagcgacccaaagaaagaggtgtcc
atcgatgacctggtgactaacatcatccgggggaatctgctccctgacgtagcggtgtgg
gtgacctccaggcccggggtggcctcactaatccccggaggattggttgacagggtgact
gaaatcccaggattcagctcaaaggacatccagctcttcctaaaccaccacttctccgag
agggatttttccagtaagatctgggcgcacttggagtccaataagatcctaatggtgatg
tgctacataccttgcatttcgtggatagtagcagacactctgatgtacatcatgcagagt
gaaacacaggaaagcctccccaggacgtgtaccgaactctacgctcacttttgttccatg
aaggcagaggtaggtgaaccaaggggccgggagccagtgaaaatggagcagcttcacggg
actaatcgcaaactgctgggaaaccttgggcgtctggcgttttacgggctcctcaaacac
aagtacaccttcagcgagcaggacctccgggcctacgggatagacctgctgttgacccag
tgcagtctgggggctggagttcttgttcgggaggagtcggccttgtccacgacataccgc
ttcactcacttgactctgcaggagtttcttgcagctactttctaccacatctcctccaag
cgggcactctttgacttattctcagagagcaccatgtcttggcccaagatcggtttccag
aaccacttcaaaagcgccttccagcactcgcagcaggcggaggacggtcacctggacgtg
tttgtgcgcttcctgacaggcctgctgtgtccggcggcaataaagcctctcgctgggctg
ctggccctcgggaaggacgatgggaaccagaaggcgtgggcagcggggtttctccagagt
ctgttggtcagtgggggggcggtggtgtccctgcggtcggtcaacctggcttattgttta
caggagctgcagcacacagagctgctgcggagcgtggaggaagacttgcagctgggcagc
ctggcagggaagctaactcgcgctcactgtgtggtgctgggctacctgctgcatgtgtcg
gcagagtgcagcgagcagaccaacctcaccggctccctgaactacgccacggtcaaatgt
ttgctcccacagctgctgtactgcagctttctcaggttggagaacaatcactttaaagat
gatgtcatggagctgctgggaagcctcctcagtgctaaagactgccatattcagaaaata
agtttggcagagaatgccatcagcaacaaaggtgccaaagctctgagtcgagcgctcttg
gtgaaccggacgctaacgtctctcaatctccggaacaacaacatcggctctaaaggcgca
aagttccttgcagaggctctaaaaatgaaccaagtcctggtatcaatcaacttccagaac
aattccattgaagaggaaggggctcatgctctcgcagaagtgctgcattgcaatcgcaaa
ctggtgtctctgaatttacggaagaacatggttggagctggaggagccaaaaggattgca
gaggcgctgaagacaaaccggaccctcacaaaactgattctttgtagtaaccagctcggg
gacaaaggaacagtggctctcgccgaggctctgacagtgaaccacacgctgctggtgctg
caacttcagagtaactccatcagcaacaaggggatgacggcgctaaccaaagcgctccgg
ctaaaccgtggtctggtctccttgaatttgagggagaactccattggggtcgaaggggcg
aagaacatggcccaggccctccatgaaaacaactcgcttcaggacctcgatctcacagcc
aacctcctgcacgatgaaggggttcaagctatagctggtgcgatcaaagtgaatcgaggc
ctcacctctctgcatctccagtggaatttcatcaagtgctctgccactaaagctctggcc
aacgctctcctcactaatgccacaattcagctcttggatctacaggagaatgctatcggg
aatgaaggcgtcatctttcttgccgaagccttgaaaaccaacatgtctctgcgtatattg
tgtctccagggagtctcagcgagcacaagtggcgccctggcactggcgggggctctaatg
agaaaccaaactctgcaaacactggagtga
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integrated database retrieval system
