Notothenia coriiceps (black rockcod): 104946411
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Entry
104946411 CDS
T04920
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04010
MAPK signaling pathway
ncc04260
Cardiac muscle contraction
ncc04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104946411
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
104946411
04261 Adrenergic signaling in cardiomyocytes
104946411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104946411
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104946411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_2
MCP-like_PDC_1
VWA_3
dCache_2
CobT_C
VWA_CoxE
BNR_assoc_N
Motif
Other DBs
NCBI-GeneID:
104946411
NCBI-ProteinID:
XP_010770549
UniProt:
A0A6I9MXA6
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MHVWDDPGFQYEYFNAVLINEVDEEGNSVELGGEFLLQPNDHFNNLSVNLSLSTVQVPTN
MYNKDSAIVNGVFWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVI
AFDCRNRKWYIQAATSPKNVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAY
NEELHYVESCLNGTLVQADVPNKDHFREHLQKLFAKGIGMLDIALTEAFNLLGDFNETGR
GSECSQAIMLVTDGAVDTYDAIFAKYNWPDRKLLSMAQSEGCPQPARGSTHSSLTTVMND
VVRLRQLALCYFTQISTLADVQENVMEYLHVLSRPKVIDREHDTVWTEAYIDNTMDDGKG
PVLMTTVAMPVFSTKNETRNRGILLGVVGTDVPVSELLKTVPKYKLGIHGYAFAITNNGY
ILTHPDLRPLYGDGKKRKRKPNYSSVDLFEVEWEDKEDTLRNAMVNRKTGTFSMEVKKSV
DKGKRVLVLHNDYYYTDIKGTPFSLGVALSRGHGKFFFRGNVTVEEGLHDLEHPDVALAD
EWTYCNTDEHPEHRYLSQIEAIKLYLSGHEPHLQCDKELIQEVLFDAVVTAPLEAYWTSL
VLNKSENSDKGVEIAYLGSRTGLSRINLFVVPDELTNQDFLTAEDKEGVFNADHFPLWYK
RAAEQVPGTFVYSLPFNSGSENKSVVLASTAIQLLDERKSPIAAAVGIQMKLEFFQKKFW
TASRQCAALDGKCSISCDDENINCYLIDNNGFVLVAEDYTLTGKFFGEAEGAVMSKLLQM
GSFKRVTLYDYQALCWAFSESSDSGHTLLDPYFAFFSAVKWILTELVIFLVEFNLYSWWH
SDLTAKAQRIGRSMQVPCDTEYPAFISERTIKENTGNVDCGGCIKAFVIQQIPSSNLFMV
VVDNKCDCSMFEPITMDPIEIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGGAM
GLTPSLAATLLCVLLALFPR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtctgggatgatccagggtttcagtatgaatacttcaatgcggtgttgatcaat
gaagttgacgaggaggggaacagcgttgagcttggaggagaattcctcctgcagcccaat
gaccacttcaacaacctgtcagtcaacctgagtctcagcacggtccaggtgcccaccaac
atgtacaacaaagactctgcaatcgtcaacggggtgttctggtccgaggccttgaataaa
gtgtttgttgataactttgagagggacccatcactcatctggcagtactttggcagtgcc
aaaggctttttcaggcagtacccagggatcaagtggaagccggatgaacacggggtcata
gcttttgactgtcgaaaccggaagtggtacatccaggctgccacctctccaaagaatgtt
gttatcctggtggatgtcagtggcagcatgaaaggactccgactgaccatcgccaggcag
acggtctcctccatactggacactcttggagacgacgacttttttaacatcattgcttac
aatgaggaattgcattatgtggagtcgtgcctaaatggaacattggtccaagcagatgtc
cccaacaaagatcatttccgggaacacctccaaaagctgttcgcaaaaggcattggtatg
ttagacatagccctgactgaggccttcaacctccttggtgacttcaatgagactggaagg
ggaagcgagtgtagccaggccattatgttggtgacagatggggcagtggacacatatgat
gccatctttgccaagtacaactggccagacagaaagctgctctctatggcccagtctgaa
ggatgccctcagcctgccagagggagcactcattcttcactcaccactgtgatgaacgat
gtggttagactgaggcagcttgctttgtgctacttcactcagatttcaacattggcagat
gtgcaagagaatgtgatggagtatctccatgtgctgagtcgtccaaaggtgatcgaccgg
gagcacgacacggtgtggactgaggcttacatcgacaacactatggatgacggtaaaggt
ccggttctgatgaccacagtggcaatgccagtgttcagtaccaagaatgagactagaaac
cgaggcatcttgctgggggtggttgggacggacgtgcctgtgtctgagctgctcaagacc
gtccccaaatacaagcttggcatccatggctacgcctttgcaatcaccaacaacggctac
atcctcacacacccagatctacggccactttatggagatggcaagaagcgaaagcgaaag
ccaaactacagcagtgtggatctgttcgaggtggaatgggaggataaggaggacacgctg
agaaatgccatggtcaacaggaagacagggaccttctccatggaggtgaagaagagtgtt
gacaaagggaaacgtgtgctggtgttgcataatgattactattacacagacatcaaaggg
actcctttcagtctgggggtagccctatccagaggccatggaaagtttttcttcagaggg
aatgtcacagtggaggaaggtcttcatgacttggagcatcctgatgtagcgctggcagat
gaatggacatactgcaatacagacgagcacccggagcaccgatacctgtcccagatagag
gcaatcaaactctacctcagtggacatgaaccccacctacaatgtgacaaggagctgatc
caggaggttctgtttgacgctgtggtgacggcccctttggaggcctactggacgagcctc
gtgctcaacaagtcggagaactcagataaaggtgtagagattgcctacctgggctcgaga
acaggcctgtcgaggatcaacctgtttgtggtgcccgacgagctcacaaaccaggacttc
ctgacagctgaagacaaagagggggtgttcaacgccgatcactttcccctgtggtacaag
agggcagcagaacaggttcctgggacctttgtctactcgctacccttcaactcaggatca
gaaaacaagagtgtggtattggccagcaccgccattcagcttctggatgagaggaaatca
cccatagctgcggctgttggcatccaaatgaaactggagttctttcagaagaaattctgg
actgccagcagacagtgtgcagcattagatgggaaatgctccataagctgtgacgatgag
aacattaactgctacctcattgacaacaacggctttgttttggtggcagaggactatact
ctgacagggaaattctttggagaagcagagggggctgtaatgagtaagctcctgcagatg
ggctctttcaaaagggtgactctgtatgactaccaggctctatgttgggctttctcagag
agcagtgacagtggacacacactgttagatccgtactttgctttcttctcagctgtaaag
tggatcctaactgagcttgtcatattcctggtggagtttaacttgtacagctggtggcac
tctgacctcacagctaaagctcagaggataggccggagcatgcaggtaccatgtgacaca
gagtacccagccttcatctccgagagaaccatcaaagagaacacagggaacgttgactgt
ggcggctgcatcaaggcctttgtgatccagcagatccccagcagcaatctcttcatggtg
gtggtggacaacaagtgtgactgcagcatgttcgagccaatcaccatggaccccatcgaa
atcatgtataatgaatctctcaagtgcgagaggttgaagatgcaaaaggacaggaggcgc
cctgatacctgtcacccttttcacccagaggagaactcaatggagtgtggaggagctatg
gggctcaccccgtcgctcgcggcaacactgctctgcgtcctcctggcgctgttccctagg
tga
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