Notothenia coriiceps (black rockcod): 104946542
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Entry
104946542 CDS
T04920
Symbol
clip1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
104946542 (clip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104946542 (clip1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104946542 (clip1)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104946542 (clip1)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
104946542 (clip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Tup_N
Fez1
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
104946542
NCBI-ProteinID:
XP_010770695
UniProt:
A0A6I9N971
LinkDB
All DBs
Position
Unknown
AA seq
2065 aa
AA seq
DB search
MSKASGIKGPSKIGRPPGTAAPKTNPSSAGSKVAATNKPAPDASAEDGAGESFQVGERVW
VNGNKSGHIQFLGEAQFAPGQWAGIVLDEAIGKNDGSVAGVRYFQCDALRGIFTRPSKLS
RTEGEANGTLTAPPSRASSPTPSVSSVASHTPATKSTLPSTTTSTKKTSSTATPATPVTP
ATPVTPSNLTRTNSESVSNLSETGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAKG
EWCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKVV
ATPTGLKRSPSASSISSMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQEALKEKQ
QHIEQLMNERDTERAEVAKATGHVGEMAQEMGLLRDDQEQMETKMDQLRVLVEAADKEKV
DLLNQLEEERRKVEDLQFRVEEACITKGDLETQTRLEHAHIKELEQSLLFEKTKAEKLQR
ELEDNRVATVSERSRIMDLERDLSLRSRDVADLQLRLGSQQGSEDSNSTLSPLLEEINSL
RDQLTSQETKQKEELAKYKAKLEAQEKSHSEAAAQLQAASVRLSGEHEQLQMRLSQAEKE
NADKIDLWRSKLESSIASHQQAMDELKVSFSKGAGAQAEELIETKSALERLKVEHPLALE
EAGATHEADAAAWTREKQALKTKLSSLIDDKERLEDSLRSSVERVEEQHLVEMEDVLGKL
HAGELRVKELEDKETMLAQQAQDKDRETKEQMSEIVALRSQVAQGNQGLVTLKSQMELVQ
NQGNSQDSKVSELSSQVECGQQEVLSLKQTLTTVQQEKDALEQELGGMKQKMADSTEDQT
NSSNTMQETLEKLSQKEEQCTSLTTESESLRSQLSGLERKLKAADEKLEQLSKDKCKLEN
DISDMMKTSGDSSVQLTKMNEDLMQKERRLEELQSQLTEEKEKAAHSNEQLQQEQTRKEQ
ELKETRDAHQAQMSSLQDNITNLEKAVKQSETLVEELKETQEKSSSQASELHAKDLGVLQ
SQVDTVKQELSSSKDKTKELENLVSELQTYKEQAKCLSAELDSHKHDVEQLSKNMEKQNL
DLENRCKESEDVKAEKSKLEKQLSDVQTKLSALEISHQELSVQTEELLLTEKKLSKHQEE
LLANNKSSADERNSLNTELKQLKDLLQAENKKLEHAEGEHQAQVKELQRQHEEKNDLLLK
SQQQIEAKKKQLNEDYEKVCKDKNRLEDDLNESRSKLTSEKDNLILERDSARNAKKSLDA
KNAKLQEKLKSLNLEKEDLTMKNTQLQALTETLEKDKVEMSSEFSAAVLEKQSLATLKEE
LQSKLHVTKKDFESSVRECEEHKASKTSLAQMLEEFKTNSQVTDSERLHLLQEKEELVAN
QRKVCNEKEGLLKDIEEFKEKLQVSTEQLSKSNEKLKEALSSFEQEKQTFRLQSSEIEMS
LHVVRKENMSLDSAIEQQKMDYERLAGEKGELEEKHTKTLSESNALSLERDKLASEIRTN
RDQLDSNSKTNDAVVQEKSHLTTMLEESKRQKDQIEAEMNSLKREKADLQNELQKHNSDI
ETLENGKAELIQEHSKLKTDFEKANSELVKQVDNLSKDSQGLKSLQADTDNKVQSLQNEN
QRLLQEIQELKSKIESISGAKLLLEAQLQTESSERNSTKSDKEGLSKQIEELKKTLSKVT
EENKEISSNLRNTDEQNKSFVMDAKVFKTQLKQREQETSQLTTDKEQLSSKLEDIGKQMT
SLTTEKEDLLAAKCQLEQNNSSLNTSQETLHAERSKLLGEMEKMHANQRQLEIDVKDLQI
NKEVLDKQYQSAVAEVSASSVVKEEISSSISNLASQKEALQVERDEAQQQVRKLESQLKN
AISKQLEVFLLQLILLHPNLAAPSPSPGHPPPPARELQPFGHPCLRGQFCVKGAPMKGNI
LLVFFFCLPGDEVLEQLRDDKQSAEAAIEFLNSVIVDLQKKNKEQKADLETMAAAALNGN
NPSELDNYDDHDNQPTKKKLPPRLFCDICDCFDLHDTEDCPTQMQMPDSPPHTAYHGAKG
EDRPYCNICEVFGHWTESCNDDQTF
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggccagtgggataaaagggcccagcaagatagggagaccgcctgggacagcg
gcccctaagaccaaccccagctcagcaggatctaaagttgctgcaaccaacaaaccggct
ccagacgccagtgcagaagatggtgccggggagagcttccaggttggagagcgagtctgg
gttaatgggaataagtcaggccacatacaatttttgggagaggctcagtttgcaccaggg
cagtgggcagggatcgttctggatgaggcaattgggaagaatgatggctcagtggcaggg
gtgcgctacttccagtgtgatgccctgcgagggatatttacccgcccatccaagttgtct
cgcacagagggggaggctaatggaactctgacggcacccccctcccgcgcttcttcaccc
actccttcagttagtagcgtcgcctcacatacacccgccacaaaatcaacattaccctca
actaccacatcaaccaagaagacctcctccactgcgacaccagcaacaccagtgacacca
gcgacaccggtgacaccatctaacctcacacgcacaaacagtgaatctgtctccaacctc
tctgagactggatccgtcaagaaaggggaaagggaactgaagatgggcgacagagtattg
gtcggtggcacaaaggcaggagtggtacgtttccttggagaaaccgattttgccaaaggc
gagtggtgcggtgtggaattggatgagcccttaggaaagaacgacggggccgtggcaggc
acaagatattttcagtgccaaccgaagtacggcttatttgctccagtgcacaaagtcaca
cgcatcggcttcccttccaccacgccagccaaagcaaaaacaacggttcggaaagtagtg
gccacaccaactgggctgaagcgcagcccgagtgcctcctctatcagtagcatgagctct
gtggcgtcctctgtcagcgccaagcccagccgcacaggcctgctaacagagacatcatca
cggtataatcgtaagatttccggcaccaccgccctgcaggaggcgctgaaggagaagcag
cagcacatcgagcagcttatgaatgaaagggacacggagagagctgaagtcgccaaggca
acaggccacgttggagagatggcgcaagaaatgggcctgctcagggacgatcaggagcag
atggagaccaagatggatcagttgagagtcttggtagaagctgcagacaaagagaaagtg
gatctgctgaatcagctggaagaggagcgaagaaaagtggaggaccttcagttccgcgtg
gaggaagcgtgcatcaccaaaggagacctggagacgcagaccagactggagcatgcccac
attaaggagcttgaacagagcctactctttgaaaagaccaaagctgagaaactccaaaga
gagttagaagacaatagggttgctactgtgtcagaaagatcccgtattatggaccttgag
agggacctttcactacgaagccgagatgtagcggacctgcagctgcgtctcgggtcccaa
cagggctctgaagactcaaactctaccctttctccccttctggaagagataaactctctg
agggatcagctaacttcccaagaaacaaagcagaaagaagaactcgcaaagtacaaggcg
aagttagaagcccaagaaaagagccacagtgaggcagccgcccagcttcaggctgcgtcc
gtccggctctctggtgaacacgagcagctccagatgcgcttaagccaggctgagaaagag
aacgctgacaaaattgatctgtggcgttccaagttagagtcttccatcgcctctcatcag
caagccatggacgagctaaaggtatcttttagcaaaggtgctggggcccaggcagaagaa
cttattgaaaccaaaagtgcacttgaaaggctgaaggtagagcacccgttggctctagag
gaggctggtgccacacatgaggccgatgctgcagcttggactcgggagaagcaggcgctg
aagacaaagctgtcgtctttgattgatgataaggagcgactggaggattctctacggtcc
agcgttgaaagagtagaggagcagcacctggtggagatggaggatgttcttggaaaactt
catgctggcgaacttagggtgaaggagcttgaggataaagaaaccatgttggcacaacag
gcccaagacaaggatagagaaaccaaagagcagatgtcagagatagtggctctgcgcagc
caagtagcacaaggtaaccagggacttgtcaccctgaagagtcaaatggagctggttcag
aaccaagggaacagccaggattcaaaggttagtgaattgagctcacaggtggagtgcgga
cagcaggaagtcctctctttaaagcagactctgaccactgtacagcaggagaaggacgcc
ctggaacaggagcttggaggcatgaaacaaaagatggctgacagcacagaggatcagact
aactcatcaaacactatgcaagaaacacttgagaagctcagtcagaaggaagagcagtgc
acttctctgaccaccgagtcagagtctttaagaagtcagctttccggcctggagagaaag
ctgaaggctgcagatgaaaagcttgagcagctttcaaaggacaaatgcaagctggaaaat
gatatttcagacatgatgaagacatctggcgatagttcagtacagctgacaaaaatgaat
gaagatctcatgcaaaaagaaaggaggcttgaggagttacagagtcaactaacagaggag
aaggagaaggcggcacactcaaatgaacaactgcagcaagaacagacccgcaaagagcag
gagctgaaagagaccagagacgctcatcaggctcaaatgagtagccttcaggacaacatt
actaacctggagaaggctgtaaaacagagtgagaccttagttgaggagctaaaggagacg
caagagaaatcctcctctcaggcttcagagctccatgcaaaggaccttggggttcttcag
agtcaggtagacacggtgaagcaggagctctcctcctccaaggacaagaccaaagagctg
gagaatttggtttctgagttgcagacttacaaagaacaggctaagtgtctttctgctgag
cttgactcccacaagcatgatgttgaacagttgtccaaaaatatggaaaagcaaaatcta
gatctggaaaatagatgtaaggaaagtgaagatgttaaggcggagaaaagcaaactggag
aaacagctttcagatgttcagaccaagctctctgcccttgagattagtcaccaggagctt
tcagtccagactgaagaactgttattaaccgagaaaaagctctctaaacatcaagaggaa
ctacttgccaacaacaaatcctcagctgacgaaaggaattcattgaacaccgagttgaag
cagctcaaagatcttcttcaggctgaaaacaaaaaactggagcatgctgaaggtgaacac
caggcccaagtcaaggagcttcaaagacaacatgaagagaagaatgacttgctcctaaag
tctcagcagcaaattgaggctaaaaagaagcaactaaatgaagactatgaaaaagtctgc
aaagacaagaaccgactcgaagatgacctcaatgaaagcaggtcaaagctcacaagtgaa
aaggacaatctcattttagaaagagattctgctagaaatgccaaaaagtctcttgatgct
aagaatgcgaagttgcaggaaaaactcaagtccttgaacttagaaaaagaagatcttacg
atgaagaacactcagctgcaggccctcacagaaacacttgaaaaagacaaagtagagatg
tcttctgaattcagtgctgctgttttggaaaaacagagccttgcaacgctaaaggaggaa
ctccagagtaagctccatgttaccaagaaagacttcgagagctctgtccgtgaatgtgaa
gaacataaagcctccaaaaccagcctggcccagatgctggaagagttcaagaccaacagt
caggtgactgattctgagaggcttcaccttctgcaggagaaagaagaactggttgcaaac
caaaggaaagtctgtaatgaaaaggaagggctcctcaaagacatagaagaattcaaggag
aagcttcaagtctctacagaacaactgtcaaagtccaacgagaaacttaaagaagcatta
tcatcgtttgagcaagagaagcaaacgtttcgccttcagagttctgaaattgagatgtct
ctacatgttgtacgaaaagaaaacatgagcctggattcggcaatagagcagcagaaaatg
gattatgagcgtttagcgggagagaagggagagttggaagagaagcacactaaaacccta
tctgagagtaatgctctttctctagagcgtgataagctagctagtgaaatccgaacaaat
agagaccagttggatagtaactccaaaactaatgatgccgttgttcaagagaagtctcat
ctaacaacaatgctagaggaaagcaaacgtcaaaaagaccaaattgaagcagagatgaac
tcattgaaacgagaaaaggctgacttacaaaatgagcttcagaaacacaactctgatatt
gaaactcttgaaaatggcaaagcagaacttattcaagagcacagtaaactaaaaacagat
tttgagaaggctaattctgaacttgttaaacaggttgataacctttctaaagatagtcag
ggtctgaagtcgttgcaggctgacaccgacaacaaagtgcagtccttgcagaacgagaat
cagcgtctgcttcaagagatccaagagttaaaaagtaagatcgaatcgatatcaggggcc
aagctacttcttgaggcccagctacagactgagtctagtgaacgcaattcaactaaatct
gacaaggagggtctctccaaacaaattgaggagctgaagaaaacgttgtctaaggtcaca
gaggaaaataaagagatttcttctaaccttaggaatactgatgagcaaaacaagtctttt
gtcatggacgcaaaggtattcaaaacgcaattgaagcagcgagagcaagaaactagtcag
ttgacaacagataaagaacagctatcatctaagcttgaggatataggcaaacagatgacc
tcgctgaccacagagaaggaagaccttttagctgcaaagtgtcaattggagcagaacaat
tcttctctcaacacaagccaagaaaccttgcatgcagaacggtcaaaactcctcggggaa
atggagaagatgcacgctaaccagagacaactagagattgatgtcaaggacctacaaatc
aataaagaagttttggataaacaataccagagtgctgtcgcagaggtgtctgcttcctct
gttgttaaagaagagatttcctccagcatctcaaatctagcctctcagaaggaggccctg
caggtggagagagatgaagcccagcagcaagtcaggaagctggagtcccaactaaaaaat
gccatttctaagcagcttgaggtattcctcctccaactaatactactgcaccccaacttg
gcggccccctcaccctcccccggtcatccacctccgcccgccagggagctgcagcctttt
ggacacccctgccttagaggtcagttctgtgtgaagggggccccaatgaaaggaaatatt
ctactcgtgtttttcttctgtcttccaggtgatgaagttttggagcaactaagggacgac
aagcagagcgcagaggcagcgatcgagttcctcaattcagtcatcgttgaccttcagaag
aagaataaggaacagaaggcagacttggagacaatggctgctgctgctctgaatggaaat
aatccaagtgagctggataactatgatgaccacgataatcaacccacaaagaagaagctt
cctccaagacttttctgtgacatctgcgactgcttcgacctccacgacaccgaggactgt
cccacacagatgcagatgcccgactctcctccacacaccgcctaccacggcgctaagggc
gaggatcggccatactgcaacatctgcgaggtctttggccactggaccgaatcctgtaac
gatgaccagaccttttaa
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integrated database retrieval system
