Notothenia coriiceps (black rockcod): 104946624
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Entry
104946624 CDS
T04920
Symbol
fxr2
Name
(RefSeq) fragile X mental retardation syndrome-related protein 2
KO
K15516
fragile X mental retardation protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104946624 (fxr2)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104946624 (fxr2)
Factors involved in mRNA localization
Other mRNA localization factors
104946624 (fxr2)
mRNA cycle factors
Stress granule specific factors
104946624 (fxr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
KH_2
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
104946624
NCBI-ProteinID:
XP_010770797
UniProt:
A0A6I9N2I6
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPAEYLKEIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTAERIRPLNPNSP
SSRNSFHKVPIPVPEDLRDICESENIHKDFRKAIGANCIFYSTESHELIVLSTNETTVKR
ATLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVKVREDLMGLAIGSHGAN
IQQARKVAGVTAIELEEESCTFRIYGESPEAVRQAREFLEFKEDYFHVPRDLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKPREEGGRQGAGRDDTAPVKEGMVPFVFVGTKENIS
NAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRAPASRTGGPGVEREKGYLTDDS
SNSLHTSRTYGGRGRGRRTSNSQYSGYGTNSELSNTSETEELGDRDQRPRGLGADERGSR
RGGRGRGTNTGRGRGGPGAKPSNSISSVLRDPDSNPYSLLEGEGEQAESDIVDGVADRRR
RSRRRRNDQEPSVMDAAAESDGQAAPSENGLDDEARPQRRNRSRRRRNRGNRPEGGSASR
DRQTAEGVTVADYISRAESQSRQNLPQKENHAGSEPKENGTSDTKDERTPSMGSPKGMSL
ASETLTLVNGVS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggccgtggaagttcgcggctcgaatggggccttctacaagggcttcatc
aaagatgtccacgaagactcactcacaattgtttttgaaaacaactggcagccagaaaga
cagttgcccttcagcgacgtacggttgcctcctccagccgaatacctcaaggaaatcggt
gaaggggaagaagtggaggtttactccagggccaacgaacaggagccatgtggctggtgg
ctggcccgggtcagaatgatgaagggagagttctacgtgatcgaatacgcggcatgcgac
gccacatacaacgagattgtcacagcggagcgcatcaggcccctcaaccccaacagccca
tcctctcgaaactccttccacaaggtccccatccctgtcccagaagacctgagggacatc
tgtgagagcgagaacattcacaaagacttcaggaaagctatcggagccaactgcatcttc
tacagtaccgaatcacacgaactcatcgtgctgtctacaaacgaaaccacagtaaagcgt
gcaacacttctgagcgacatgcatttccgcagcatccgtaccaaactcatgttaatgtcc
cgcaacgaggaagccaccaaacatctggagacaagtaagcagttagcatcagcgtaccag
gaggaggtgaaggtcagggaggacctgatgggacttgccatcggttcccacggcgccaac
atccagcaggccaggaaggtggccggagtcacagccatcgagttagaggaggagagctgc
acattcaggatctacggagagtccccagaggcagtaaggcaggctagagagtttctcgag
ttcaaagaagactactttcacgtaccgagggacctcgtaggcaaagtcatcggcaagaac
ggcaaagtcattcaggagattgttgacaagtcaggcgtggtccgcgtcaggatcgaggga
gacaatgacaaaaagcccagagaggagggaggcaggcagggggcaggcagggacgacact
gcccctgttaaagagggcatggttcccttcgtctttgtgggaactaaagagaacatcagc
aatgcccaggctctcttggagtaccatgtgtcctatctccaggaggtggagcagctgcgc
ctggagcgtctccagattgacgagcagctccgtcagatcggggttggttaccgcgctcct
gctagccgaactgggggccccggtgttgaacgggagaaaggttacttaacagatgatagc
agcaactcactccacacctctcgcacctacggaggccgtggcagagggcgtaggacctca
aacagccagtactctggatatggcacaaactctgagctgtccaatacttctgagacagag
gaattgggcgatcgcgaccagcggccccgtggcttaggggccgatgagcgaggatcccga
cggggcggaaggggccgaggcacaaacacaggaagaggccgtggggggccaggggccaag
ccttccaactccatcagctcagtgctgagggacccggacagtaacccgtactccctgctg
gaaggcgagggagagcaggccgaatctgacattgttgacggcgtggcagaccgccgcaga
cgctccagacgtcgccgtaacgaccaggagcccagcgtgatggatgctgccgcagagtca
gacggccaggccgcccccagtgagaacggactggatgatgaagcccgacctcagcgccgc
aaccgaagccggcgccgtcgcaaccgtggcaaccgccccgagggaggttcagccagtcgt
gacagacagacggctgaaggcgtgactgttgctgactacatatcccgtgctgagtcccag
agcagacagaacctgccccagaaggaaaaccacgctggctccgagcccaaggagaacggg
actagcgacacaaaggatgagcgaacgccctccatgggttcccccaaaggcatgagcttg
gccagcgagaccctgaccttggtcaacggggtctcttaa
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