Notothenia coriiceps (black rockcod): 104946946
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Entry
104946946 CDS
T04920
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncc03021
]
104946946 (aff3)
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104946946 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
104946946
NCBI-ProteinID:
XP_010771166
UniProt:
A0A6I9N9Z9
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPTVLGDKGKLSIVCFLIRCAYSQVTRSQHIICAKDILEDMTQSWTSQHALGGDQAQHIL
YNPKEAKLPTAQQRQSRGDVQLRVTHHPRVAPHKSMLVDDLKLSSDEDDTQRATHESAPW
DGHSLSAHRAHTHGRRVRHSSSDSSGSDSSAESCSSSSSSSSSSSSSLHSRSRSPDPHPD
PASPPPCNNTETDHPPAAQWQLDKWLKKSRKKSTSSDHDPSQIIPGRLPSLPNNRAPSPA
RSWDIDRDYSPSQSPIPSPQFNYSHSNSPLPSPGYSFCPSPSPFPSTCPSPGPSLIPSPV
PSVCPSPCGRTRASRSPSPIPRDPPRSPSPSLPAPSKVRHYLEVQTTQPSLTTNHHRTKS
RPWITPLPNSDTKSKPTTSTHLHQHRPKTRPPQEQEQSKLKTSQIHSHKSRHKPNSNPSL
KQISEAPKAKHTSHFEQTQGSRSNHKSSHKPRPSLQSSSQHSTTTAKHLAPGSRETNSGH
SSHSQSTSKAATNPTTGLNARSNPSIKPRAKSSEAPAPVHVNQTKPTQTKAQCKELRGDH
LSQAEGRKHERKEDRHREQKQGKQGRKEDRRLAEEQLLRRPWIHSSAEEEEEEEEVIVIE
SRREERGENRRRREQQQRREWQTKPRVPTNTTQQRHQDYSHRTKKGGRSEEERELSPPPS
RSPSPHKVHSSSSSNSESESEHRAPITKVQADSTSHRKLPQRGGRSEGDRPKVVQPTGGH
PGEGGQKHYTLVPFGRSEQATAPSQRGLRNLVVHIDLCLLKRVPDSTTTSPVKKPSASSS
ASSATKDKQREAMKHLCLPEAASKDSKRKRKLENGVSHRESKRSLPHANDPSGHTEPSSL
TAERNFVTETLHNGYLEEYMDNKRPLSPLSPLSDSPETTKPPPKTKTSEQLHVHKNRDKN
RDSALKPKMEVECVKVLREPQPPESWGPAGHRGAVPNNETPHHAEYYLHEAKRMKHRADA
MVDKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGA
RHEDKQLAVLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKVGYSSPKVPSTPPPGWSD
SGKGAGGPPDSLSPNGKHLNRGSNGGSAFPSHISIPQRIHQMAANHLNITNSVLYSYEYW
EVADNLAKENKEFFNYLNTLSGPLTLHSSIAHAVQYTRQALQWIRISAKLN
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtcctcggcgacaaagggaaactttccatcgtctgttttctgatcagatgc
gcatattctcaggtaacaagaagccaacacatcatctgtgccaaagatattctggaggac
atgactcagtcctggacgtcccagcatgccttagggggagaccaggcccaacacatcctc
tacaaccctaaggaagcaaaactaccgactgcacaacaaagacaaagtcggggggatgtg
cagcttcgagtgacccatcatcctcgtgtggcacctcacaaatccatgcttgtggatgac
ctgaagctgagcagtgatgaagatgacacccaaagggcaactcatgagtcagctccctgg
gacggacacagcctgtcagcacatcgagcacacacacatggcaggagggtgagacattcc
agctctgactcgtcaggctcggactccagcgcagagtcgtgcagcagcagcagcagcagc
agcagcagcagcagcagcagccttcactcccgcagccggagcccggaccctcacccagac
cctgcatcccctccaccctgcaacaacacagagactgatcacccccctgcggctcagtgg
cagttggataaatggctgaagaagtcccggaaaaaatccaccagcagtgaccacgatcct
tcccagatcatcccaggacgccttccctctcttcccaacaacagagccccatctccagcc
cggtcctgggacatcgatcgggattacagccccagccagagccctatccccagcccacag
ttcaactacagccacagcaacagtcccctccccagcccgggttacagcttctgcccgagc
cccagtccgttccccagcacctgcccgagcccgggacccagtctgatccccagtccggtc
ccgagtgtttgccccagtccgtgtgggagaactagagccagtcgaagcccgagcccgata
ccaagagaccctccaaggagccccagtccgagcctgcctgctccttccaaggtccgacac
tacctcgaggttcagacgacacaacctagccttacgaccaatcaccacaggacgaaaagc
aggccatggattaccccattgcctaacagcgacaccaagagcaagcctacaaccagcact
catcttcatcagcaccggccgaagactcgacctccgcaggagcaagagcaaagcaaacta
aagacttctcagattcacagccacaaatctagacacaagccgaactcgaatccaagttta
aagcagatttccgaggctcccaaagccaaacacacgtctcattttgaacaaactcagggt
agtagatccaaccacaaatccagccacaagcccaggccttcgttgcagtctagctcgcaa
catagcaccacaacagcaaagcacttagcccccggaagtcgtgaaaccaactctggtcac
agttctcattcccaatctacctctaaagctgctactaatcccactactgggttgaacgct
agatcaaatcctagcataaaaccaagagccaagtcctcagaggccccggctcctgtgcat
gttaaccaaacaaaaccaacgcagacgaaagctcagtgtaaggagctcagaggagatcat
ttgagccaagctgaggggagaaaacacgagagaaaagaggacagacatcgggaacaaaag
caagggaaacaggggagaaaggaagacaggaggctggcggaggagcagctactgagacgt
ccctggatccacagttcagctgaagaagaggaggaggaagaggaggtgatagtgatagag
agtaggagagaggaaagaggggaaaacaggaggaggagagagcagcaacaacgacgcgaa
tggcaaaccaaacccagagtgcccacaaataccacgcagcaacgacatcaggactactca
cacaggacaaaaaagggaggaagaagtgaggaagagagggagttatcgcctcctccatcc
cgttccccatctcctcacaaagtacactcctcctcctcttccaattctgagtctgagtct
gaacatcgggctcccatcactaaagtccaagcggactccacctctcacaggaaactcccc
cagagaggaggcaggtcggagggtgacaggccgaaggtggtgcagcccaccggaggtcac
ccaggtgagggggggcagaagcactacaccctggtgccgtttgggcggagcgaacaagct
acagcgccttcccagagagggctgaggaacctggtggtgcacatagacctgtgtctgctg
aaaagagtcccggacagcaccactacttccccggtgaaaaagccctccgcctcttcctcc
gcctcttcggccactaaggacaagcagagagaggcgatgaaacacctgtgcctccccgag
gctgcgtcgaaagacagcaaaaggaaacgcaagctggagaacggcgtgtcacacagagaa
agcaagaggagtcttcctcatgcaaacgacccatcaggacacacagagccttcaagtctc
acagccgagcgcaactttgtgactgagactttgcacaatgggtacttggaggagtacatg
gacaacaagaggccgttgtctcctctgtctccgctgtcagacagccctgagaccaccaag
cccccccccaaaacaaagacttccgagcagctccatgtccacaagaacagagacaagaat
agagattctgctttaaagcccaagatggaggtggaatgtgtcaaagtgttgagagagccc
caaccgcctgagtcctggggccctgcagggcacagaggggccgtgccaaacaacgaaact
ccgcaccatgctgagtactacttgcatgaagccaagaggatgaagcaccgcgcagacgca
atggtggacaagctggggaaggctgtgaattacgtggacgccgctctgtccttcatggaa
tgtgggaaagcgatggaggaagggccgctagaggcaaagtctccctacaccatgtactca
gaaaccgtggagcttatcaggtacgccatgaggctgaagagccactccgggcccggggcg
agacacgaagacaaacagctggcggtgctttgtttccgatgccttgcacttctttactgg
caaatgtttcgtttaaagaaggaccatgcactgaaatactccaaagttctgctggactac
tttaaggtaggctatagttctcccaaagtgccttctacaccccctcccggttggagtgac
tctgggaagggagcaggaggaccccctgattcactctcacccaacggcaaacacctgaac
cgggggtcaaacgggggcagcgccttcccctctcacatcagcatcccccagcgcatccac
cagatggcagccaaccacctgaacatcaccaacagcgtgctgtacagctacgagtactgg
gaggtggctgacaacctggcaaaggagaataaagagttcttcaactacttgaatacgttg
tctgggcctttgactcttcacagtagcatcgctcacgcagtccaatacaccagacaggct
ctgcagtggatacgcattagtgccaaacttaactga
DBGET
integrated database retrieval system
