Notothenia coriiceps (black rockcod): 104947001
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Entry
104947001 CDS
T04920
Symbol
plekhg1
Name
(RefSeq) pleckstrin homology domain-containing family G member 1 isoform X1
KO
K23859
pleckstrin homology domain-containing family G member 1/2/3
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
104947001 (plekhg1)
Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
104947001 (plekhg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
RHG20_PH
IQ_SEC7_PH
PH_10
DUF575
RasGAP_C
Motif
Other DBs
NCBI-GeneID:
104947001
NCBI-ProteinID:
XP_010771227
UniProt:
A0A6I9N3Q2
LinkDB
All DBs
Position
Unknown
AA seq
1585 aa
AA seq
DB search
MPTDDYNYLPDALPPLPEVPDSGSALSIPARCLGNPAFRHASLRYCSALSMDSSLDSAER
PISYSSTSSSASSRDSHCSLGSRSTLVPAPHCNPATSDRDSGAIRLELVPARQLGCQEGE
DRNDGGVDTGRGQSGGQTLTEHSGPEVSPDGGEGKGQVQGPRTYVDRVVQEILDTEKTYV
QDLRSIVEDYLESISNQSRLALSSEDKGSLFGNIQDIYHFNRDLLHDLEKCNADPVAIAE
CFVSKSEEFHIYTQYCTNYPRSVAVLTECMRNKALAKFFRERQESLRHSLPLGSYLLKPV
QRILKYHLLLHEIANHMEKDTETYEVVQEAIDTMQRVAWHINDMKRKHEHAVRLQEIQSL
LTNWKGPDLIGYGELVLEGTFRLQRAKNERTLFLFDKLLLITKKREETYTYKAHILCCNL
MLVEVIPKEPLSFSVFHYKNPKLQHTVQAKSQQDKRMWILHLKRLILENHPAKIPAKAKQ
AILEMDAMHHPGFHFSPDGGKKDSPQTKEGPTPRRGRRKEPLSKLLKNAKQNAANTDGEK
RISLGATLLSPMSQLALGTIGRSRSLINQSQESLDPGDHYDHSDREEEPHQQDADDEDDS
GLGGGKRLRVPGKSSRKRLNPQASVDSIEQWKTFNMSTSDLQRARESLVREGSHHPPLLR
TPAVMEEPPDTPVPAVVVTESDQSVRNIWADHRARRAMFPTRQRTMQPEDEDEDIYQMFV
PTEQSAPEPEVHSERSEAPSSPRTARPCSWHVEQVPTVHVDPPSDDSRVLRRASSAGEKA
SEGLQSPDDDQAGNSNLEVIHTESSSNDISGSSSAEQLTLDDVENVYDNISYEDLKSMGL
VRRDPEESQSRKETPSDAQGSQDQAAKVLTAPETPVVPERVIQQDISSERKPSPMQEGRP
FGSCELKIVEENIYDTICFRDPPTTEFKGVNEGNKLQQERDSLLASEPDLTRSLGGFVSE
ESLHFGEDEALHPVPCSSEPDYSSSSASETFSQRPQKGDKMSEQVDEIWNDLENYIKINE
KKADRLPAAFPVSARESPKKAPSVKNSPTKIPLVISPQAASNPTKSPPTHQPKPPPVTST
QSFTIPVINLPDLQSECLAAEESYSPSLSSRPLPPPPVTPEPLAGTVKSIRNRLARLSSG
SFRLEDDDLVELPPRNTLQRDIPLKDLHSLFPGELAGLASPLASPLASPLASPLASSSLL
LGESVDLEMEKSKNRVFLMARQYSQKIKKANQLLRMRSMDPGDACGRSRAEKKQKDLAAI
LEEKKQGGSAIGAKIAEYSQLYDQVMFKDPSHHSHPGLPSSPSMPETSLEEDWLHSTYSN
GELASFVSSSSDLNDARASSTLQRRLTSACSIPSLKTSPTTPPSQRWSSCMSPPSEQEEH
VYSSIKRHPSLNAPSSPSSESPPSSHCQSLGSLGSQEKTELKCNVPSDRLRGPSLGRTGR
QSSLPERSTHGQSDMTLHDGQQVVVLNRASALSILNATQNYMANFKDDEEDDDDYVEIRS
EDESELEQDRLARQNGSSAVLPNQNRGLVHSQSLPCSPLHSCDQQRALDREQLEKYLWSE
PQQSQPKIVQSLREKFHCLSSSSFA
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgatgattataactacctgcctgatgcgctgcctcctcttcctgaagttccg
gactccggctcagccctgagcattccggcccgttgcctcggcaacccggccttccgccac
gcctcgctgcgctactgctccgccctcagcatggattcctctctggacagcgccgagagg
ccgatcagctacagctccacctcttcgtccgcttcctcccgggacagtcactgctcgctg
ggcagccgctccaccctcgtccccgcccctcactgtaaccccgcgacctccgaccgggac
tccggggcgatccggttagagctggtcccggcccggcagctgggatgccaggagggagaa
gacagaaatgatggaggggtggacacggggagggggcagagcggtggacagactctgaca
gaacattcagggccggaggtgagccccgatggaggagaggggaaaggtcaggtgcaggga
cccaggacgtatgtggaccgggtggtgcaggaaattctggacactgagaaaacctacgtc
caggacctgcgaagcattgtagaggactacttggagagcatcagtaatcagtctcggctg
gccttgagctctgaggataaaggctctctattcggcaacatccaggacatctaccacttt
aacagagaccttctgcatgatcttgagaagtgcaacgctgaccctgtggccatcgcagag
tgcttcgtatccaagagtgaagagttccacatttacactcagtactgcaccaactaccca
cggtcggtggctgtgctaacagagtgcatgaggaacaaggcgttggccaagtttttccgc
gagcgccaggaatctctgcggcactccttgcctctgggctcctacctgctcaagccagtg
cagaggatcctcaagtaccacctcctgctacacgagatagccaatcacatggagaaggac
acggagacgtacgaggtggtgcaggaagccatagacaccatgcagagagtggcctggcac
atcaacgacatgaagaggaaacacgagcatgctgttaggttgcaggaaatccagagcctg
ctgaccaactggaaaggccctgatctgattggctacggagagttggtcctcgaaggaacg
tttcgtctacagcgagctaaaaacgagagaaccctcttcctgtttgacaagcttctgctc
attaccaagaaacgagaagaaacgtacacgtacaaggctcacatactgtgctgtaacctg
atgctggtggaagttatcccgaaagaaccgctgagtttcagtgtgtttcactacaagaac
cccaaacttcagcacacggtccaggccaaatcacagcaagacaagcgcatgtggatctta
cacctcaagagacttatacttgaaaaccatccggccaaaatccctgccaaggctaagcaa
gcaattttggagatggatgcaatgcatcatcctgggtttcatttcagccccgatggaggt
aagaaggattcccctcagaccaaggagggtccaacccctcgtagaggacgcaggaaagaa
cctctatccaaattgttgaaaaatgccaagcagaatgctgccaacacagacggagaaaag
cggataagtctgggcgccactctgctctcgccaatgtcccagctggctttgggcaccatt
ggtcgaagccgcagcctcatcaaccaatcacaggagtccctggaccccggcgatcactac
gaccacagtgacagagaagaggagcctcatcaacaagatgctgatgatgaagatgacagt
ggtttggggggaggaaagcgtctgcgagtgcctggtaaaagcagtaggaagagactgaac
cctcaggcgtctgtcgacagtatagaacagtggaaaaccttcaacatgagcacttcagac
ctacagagagccagagaatccctagtgagggaaggaagtcaccaccctccgcttctcagg
acccctgccgtgatggaggagcctccagacacccccgtcccagctgtagtagtcacagaa
agcgaccaatctgtgaggaacatctgggcagaccaccgtgctcgcagggccatgttccca
acccgccagcgaaccatgcagccggaagacgaggacgaggacatctaccagatgtttgtc
ccgacggagcagagcgcaccagaaccagaagtgcactcggagaggtcagaagccccctcg
tcgcccaggacggctcggccctgcagctggcacgtggaacaggtgcccactgtgcatgtt
gaccccccctctgatgatagcagggtcctgcggagggcgagcagcgcgggggagaaggct
tcagaggggctccagagtcctgatgacgaccaggccggtaacagcaacctggaggtgatc
cacactgaatcctccagcaatgacatatctgggtcatcatcagccgaacagctgacgtta
gacgatgtagaaaatgtgtatgacaacatcagctacgaggatctgaagagcatgggcctt
gttagaagagaccccgaggagagccagtcacggaaagaaaccccctcagatgcacagggt
tcccaggaccaggcagcaaaggtactgactgctccagagactcctgtggtcccagagcgt
gtgatccaacaagacatttcttctgagagaaaaccgtcgcccatgcaggaggggaggcca
ttcgggtcatgtgagctgaagatagtagaagaaaacatctatgacaccatctgcttcagg
gacccccctacgacagagtttaaaggggtgaatgaagggaacaaactacaacaggagaga
gacagtctgctggcctcagaaccagatctgactcgaagccttggagggtttgtgtccgag
gagagcctccactttggagaggatgaagccttgcaccctgtcccatgttcctctgagcca
gactattcctcctcgtctgcctctgagactttctcgcagcgcccgcagaaaggggacaag
atgtcggagcaagtcgacgagatctggaacgatctggaaaactacatcaagatcaatgag
aagaaagccgatagacttcctgctgccttccctgttagtgcccgtgagtcgcctaagaaa
gcaccatcggtcaaaaacagccccacgaagattcctcttgtaattagtccccaagcagcc
agcaatcccaccaagagtcccccaacacaccagcctaagcccccacctgttacctccacg
cagtcattcacaatcccagtcatcaacctccctgacctgcaaagtgaatgccttgctgca
gaagaaagctacagcccgtctttgagctcacgcccccttcctcccccgcccgtcaccccc
gagcccctcgcaggcacggtgaagagcatcaggaacagactggctcgcctcagtagtggc
agcttccgcttggaggacgacgacctggtggagcttcctccaagaaacacccttcagagg
gatattcccctcaaggacctccatagtttgtttccaggggagctggcaggcctggcctcc
cctctggcctcccctctggcctcccctctggcctcccctctggcctcctcctccctcctg
ctgggggagtctgtggacctggagatggagaaatccaagaaccgagtgttcctgatggca
cggcagtacagtcagaaaatcaagaaagccaaccagctgctgcgcatgaggagcatggac
cctggagacgcctgtgggcggagcagagctgagaagaagcagaaagacctggcagccatc
ttggaagaaaagaagcaagggggctctgccataggtgcaaagatagcagagtactctcag
ctttacgaccaggtaatgttcaaagacccctcgcatcactcccacccggggctaccgtcg
tctccctccatgcctgagacctccctggaggaggactggctccactccacttacagcaat
ggagagctggccagcttcgtctcctcgtccagtgacttaaacgatgctcgggcgtcctct
acccttcagcgcagactcacctctgcctgctctatcccttccctaaagacctctcctacc
acaccaccatcccagagatggagctcctgcatgtctccaccgagcgaacaggaggagcac
gtgtacagttccattaaaagacatccttccttgaacgctccttcttcaccctcgtcagag
tctcccccgtcgagtcactgtcagtctctcggctctctgggcagccaggagaagactgaa
ctcaaatgtaacgtaccctcggacagactccgcggccccagtctgggtcggaccggtcgg
cagagtagtctcccagagcgctcgacccacggacagtcagacatgactttacacgacggt
caacaggtggtcgtcctgaaccgggcttctgcactgagcatcctcaacgccactcagaac
tacatggctaactttaaggacgatgaggaagacgatgacgactacgtagagatccgctcg
gaggacgagagcgagctagagcaggacaggttggcgcggcaaaacggcagctcggcagtc
cttcccaaccagaaccggggtctggtccactcccagagtctcccgtgcagcccgctgcac
tcctgcgatcagcagagggctctggaccgtgagcagctggagaagtacctgtggagcgag
ccgcagcagagccaacccaaaatcgtccaatctctgagggagaagtttcattgtctgagc
tccagtagcttcgcctga
DBGET
integrated database retrieval system
