Notothenia coriiceps (black rockcod): 104947031
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Entry
104947031 CDS
T04920
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104947031 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104947031 (snrpd1)
03032 DNA replication proteins [BR:
ncc03032
]
104947031 (snrpd1)
Spliceosome [BR:
ncc03041
]
Complex A
U1 snRNP components
Sm proteins
104947031 (snrpd1)
U2 snRNP components
104947031 (snrpd1)
Complex B
U1 snRNP components
104947031 (snrpd1)
U4/U6.U5 tri-snRNP components
104947031 (snrpd1)
Complex C
U2 snRNP components
104947031 (snrpd1)
DNA replication proteins [BR:
ncc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
104947031 (snrpd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
Hfq
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104947031
NCBI-ProteinID:
XP_010771262
UniProt:
A0A6I9N3T9
LinkDB
All DBs
Position
Unknown
AA seq
120 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGGRGRGRGRGRGRGRGRGGPRR
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgtcaggtttttgatgaaactcagccatgagacggtcaccattgaactgaag
aatggcacccaggtccatggcaccatcacaggtgtcgatgtgagcatgaacacccacctg
aaggcggttaaaatgaccctgaaaaacagggagcccactcagctggagtcgctgagtatc
cgtggcaacaacattcgctacttcatccttcccgacagcctcccactggacaccttgctg
gttgacatcgagcctaaagtcaagtcaaagaagagagaagcagtggctggacggggagga
agaggcagaggaagaggccgcggcagaggaagaggaagaggccggggcggcccgaggaga
tga
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integrated database retrieval system
