Notothenia coriiceps (black rockcod): 104947047
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Entry
104947047 CDS
T04920
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
ncc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104947047 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104947047 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104947047 (nup153)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104947047 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
104947047
NCBI-ProteinID:
XP_010771279
UniProt:
A0A6I9MZN9
LinkDB
All DBs
Position
Unknown
AA seq
1490 aa
AA seq
DB search
MTAIRRRNTDRHSDERAMAATGGGKIRSRRYHIASKPYAKSKQPSGIISRVTDTVKSIVP
SWLQKYFKKEDAPEGGGDGLGMEQNCQTPPPPNGSEEGPPLLDGRDSPEPSPSNTEPSTS
RASLNFQEYVLSRPPLSRSHLHFPPLDATSPTLGSPSNLFSQPSTSSAPGPFSTGFSLVK
EIKDNLSQHEDDNISTTSGFSSRASEKDVPTSKTASLPQLWSPETERTHSHGSHHAHQSS
LKRPAFNLSVFGTSSNSSLNNTVLNSSQLGDSPFYPGKTMYGGAAAVRSARGRPGTPYQA
PVRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADARRIPSAASSPLSASMDGSNL
DVSHYQSKKKRMEPSLPPVQKLMVPAAASVSGNRSVSFRPTLTPGGVSRTLDRTPRDTPT
RQSQKLPEATPGPSKSTMVSSGPAYPLSSTPAASSVGSGGGKMKRERMSARPSSKHVDEE
EMAELPDLPTIALPIHTMPSFNFTSPLPPPTTTISATPNFMPMTPIKETVTNKELPKAST
PPCVPFTFSSPIVKATAGSPPSLSPSAEFTFSAPVAKLGPSMSNGNLASPIVAVKLTPSK
STEDFEGPFKPAKTLKQGSVLDLLKAPGFASPIARTSPTPDEAPQLSSTKSTAPSFSSST
TTTTTSSLTSIGFGAAFKAPPGWSCDVCMVQNKPSDTKCVCCCAPQPKSMDSKPLTATPD
VVESSTSTSAGFGTMFSKSAGTWDCDTCLVRNKPDAVKCVACETAKPGTGLKPSTTLPSA
FSAVKTVSLPTAPVSTGFTGFGDKFKKAEGAWECDTCMVENKAEDTKCVACSSAKPGASA
AASSLASSAPLIGFGDAFKKPEGAWECDVCLVQNKAADVQCVACQTAKPGAIVEPKAFGL
FFGSSAGGTSGTTSGGFKFGTTDSTLGSGAAGFKFGGSLTESSSSSSGGFKFGVPSESTS
NNTTASSGFKFGSSSEGFTFGDASSDDKKSDPPAAGSGFKFGASGGTPFGTGSSSTESNS
SKTGFTFGLSKPEEKTPDSSSSSQEKSESVASSNDTAPTNSTSSKGSVFGRLGDRSSTTA
TPPGGSTLGSLQADKETAAPTFAFGKPEEEKEAAASSAPSGFLFGAAGKDAEAAPAPAAT
GGFSFSKTSAPTEQPPPTFNFGKPADKSETTTAEAPNPSFTFGQSAADSSAAPKPAFSFM
SGNPIVNSTTSTSTTPTPTLFGSSTPSSSSSTQAPFAAPSTLMFGQPAASSTDAPPAKAF
LFGQSQDSQPAAPSAVNLNSISSSAQPFLFGAPAAAAPPPPPAAAAAAAAPSFGFGAAAP
SAASSAAPSAAPSPFAFSSAPSAGFGANQTPSFGSSFGSPFTAAPSQPPAFGAKPNAAPV
FGQQNNSTPVFGAAVNSAPGGGFQFGGASAFGAPNNASGGGVFTFGGGPAASPAPPANPS
IPPQAPGSGFNFSQPPAFNIGAAKTFTASSPAGQPAIAGRKIKTAVRRRK
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacaccgatagacactcagacgaaagagccatggcggcc
acgggtggagggaaaattagaagcaggagatatcacatcgcctctaaaccttacgccaag
agtaaacagccgtcaggcatcatcagtcgagtgacagacacagtaaagagcatcgttcct
tcctggctgcagaaatacttcaagaaggaagatgctcctgaaggaggaggagatggactg
gggatggagcagaactgccagactcctcctcctcccaatggcagcgaagagggccctcct
ctgcttgatggacgagactccccagaaccaagccccagtaacacagagccttcaaccagc
cgggcttccctgaactttcaggagtatgtgctttctcggccacctctgagtcgttcccat
ctccactttcccccgctggatgccacttccccgaccctggggtcccccagcaacctcttc
tcccaaccctccacctcctcagcccctggacccttttccacaggcttctccttggtcaaa
gaaatcaaggacaacctatcgcagcacgaagatgataacatctccaccactagcggattc
tcctcccgcgcctcagaaaaagatgttcccacttccaaaacagcatcacttccacaactt
tggtccccagagacggagagaacgcactctcacggctctcatcatgctcaccagtccagt
ctgaaaaggcctgctttcaacctgtctgtatttggaacttcctccaattcgtcattaaac
aacacagtgctgaactccagtcagctcggagattcccccttctaccccgggaagaccatg
tacgggggggcagcggcagtcaggagcgctcgaggtcgtcctggaacaccttaccaggcc
ccagtgaggagacagatcaaggccaagcctgctggggctcagccctgtggagtgaccagc
gccacagccaggcgcatccttcagtccctggagcgcatgtccagccccctcgctgatgca
aggagaatcccatcggctgcctcgtcccccctttcagcatcaatggatggttcaaatcta
gatgtttcacactatcagtcgaaaaagaaacgtatggagccctctctccccccggtgcag
aagctcatggttcccgctgcagcgtcggtgtcaggaaaccgctccgtgtcgtttaggccg
actctgactcctggaggggtgagccgaactctggacaggactcccagggacacgcccaca
aggcaatcacagaaactacctgaagcaaccccaggtccatctaaaagcacaatggtttcc
agtggcccggcctatcctctgtccagcacgcctgcagccagcagcgtgggctctgggggg
gggaagatgaagcgagagaggatgagtgcacgaccttcctctaaacacgttgatgaggaa
gagatggctgagctaccggacctaccaaccatcgcccttcccatccacaccatgccttcc
ttcaactttacctccccactcccacctcccactaccaccatcagtgcgacccccaacttc
atgccaatgactcccattaaggagactgtcacgaataaggagctaccaaaagcctcgacc
cctccctgtgttccttttacattttcctcccccattgtcaaagcaactgctggtagtcct
ccttccctttccccctcagctgaattcacttttagtgcacctgtagcaaagttgggtccc
tccatgtcaaatgggaacctggcctctcccatagtcgcagtgaagttaaccccaagcaaa
agcacagaagactttgaaggacctttcaaaccagccaagaccctgaagcagggcagcgtg
ctggatcttctcaaagcacctggctttgcttctcctattgctcggacctccccaacccca
gacgaagctccccagctgagctcaacaaaatcaacagccccctccttctcctcctccacc
accactacaaccacctcctccctcacatcaataggctttggtgctgcgttcaaagctcca
ccaggctggagctgtgatgtctgcatggtgcagaacaagccatcggacaccaagtgtgtg
tgctgttgtgccccacagcccaaatctatggacagtaaacctttaacagccactccggat
gtggtagagagcagcacatcaacctctgcaggttttggcaccatgttctccaaatccgca
ggaacctgggactgtgatacgtgtctagttcgaaacaaacctgatgcagtcaaatgtgtg
gcctgcgaaacggccaaacctgggacagggcttaaaccctcaacgactcttccttctgcc
ttctcagctgtaaagactgtatccctacccacagcccccgtctctacagggtttactgga
tttggagacaagttcaagaaagctgagggagcatgggaatgtgatacatgtatggtagaa
aacaaggcagaggacacaaagtgcgtggcctgcagcagcgccaaaccaggagcctctgca
gcagcctcttctttagccagcagtgctccattgattgggtttggagatgcgttcaagaag
ccagagggtgcctgggaatgtgatgtctgtctagtgcagaacaaggctgctgatgtacag
tgtgtggcctgtcagacagccaaacctggagctattgtggagcccaaagcttttggtttg
tttttcgggtcgtcagctggtgggacttcaggcactacttctggaggatttaagtttggc
acaacagacagtaccttgggatccggagccgcaggtttcaagtttggaggctcattaaca
gagtcctcctcttcatcgtcaggtggattcaaatttggagtcccatcagaaagtacatct
aacaacactactgcctcctctgggtttaagtttggcagctcatcggagggctttacattt
ggggatgcctctagtgatgacaaaaagtcagacccacctgccgcaggttctgggtttaag
ttcggagccagcggtgggaccccgtttggaaccggatcctctagcacagaaagtaactcc
tctaagaccggcttcacctttggactttcaaaacctgaagagaaaacacccgacagctcc
tcatcttcacaagagaaaagtgaaagcgtagcatcatcaaatgacaccgcacccacaaac
tctacttcaagcaaggggtctgtatttgggagattgggcgatcgtagttcaacgaccgcc
acaccaccggggggctccacgttgggatctctacaggcggacaaagagacagctgctccc
acctttgcctttgggaagccagaggaagagaaggaagccgccgcgtcctcggctccatcc
ggcttcctcttcggagctgctggtaaagatgcagaggctgctccagcaccggccgctact
ggaggattctccttcagcaagaccagtgctccaacagaacaacccccacccacttttaac
tttggcaagccagcagacaagagtgaaacaactactgcagaggccccgaacccgtctttc
acctttggacagagtgctgcagattcttctgctgctccaaaaccagcattttcctttatg
tctggtaatcccatcgtcaactccaccacctctacatccaccaccccgacgcccactctg
ttcggctcctccacccccagcagcagcagctccactcaggctcccttcgcagctcctagc
actttaatgttcggtcagcctgctgcctcctccaccgacgctcctcctgccaaagccttc
ctgttcggccagagtcaggacagccagccggcggcaccgtcagcggtcaacctgaactcc
atctcctcctccgctcagcccttcctcttcggtgctcctgctgccgctgctcctcctcct
cctcctgctgctgctgctgctgctgctgctccatcattcggcttcggagcagctgcgccc
tctgctgcctcttctgcagctccgtctgcagctccctctccatttgcgttcagctcggcc
ccctctgctggatttggggcgaaccagaccccttcattcggctccagctttggatctccc
ttcaccgccgcaccctcccagccccctgcatttggagccaaacccaacgccgccccggtg
tttgggcagcagaacaactccacacccgtctttggggccgctgttaattctgcaccaggc
ggaggcttccagtttggaggagccagtgcatttggagccccaaacaacgcctcaggagga
ggagtgtttactttcggaggagggcctgccgcttccccggccccccctgccaacccctcc
atcccaccccaggcccctggaagcggattcaacttttcacaaccccccgcattcaatatt
ggggccgcaaaaaccttcaccgcctcctcccctgctggacagccggcgatcgctgggcgt
aagatcaagacagcggtgcggcgcaggaagtaa
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