Notothenia coriiceps (black rockcod): 104947071
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Entry
104947071 CDS
T04920
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104947071
Membrane trafficking [BR:
ncc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
104947071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
Ig_3
LRR_14
LRR_9
Ig_2
ig
V-set
LRR_Zer-1
LRRNT
LRR_EndoS
Ig_5
C2-set_2
Motif
Other DBs
NCBI-GeneID:
104947071
NCBI-ProteinID:
XP_010771312
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MFVESVVRWGAWSIVFQFVLGASAGGCPPRCVCRPEAKELICSGKHLNSVPEGFSGDARH
LDLSHNKIKTVGRRQFSGLPQLQELDLSDNIISMIEVEAFQGLQNLRTLRIKNNRLKIIP
VGVFSGLSSLRFLDLSQNEILVFLDYTFKEMVNLQTLEVEENDLVFISQRAFYGLQNLQE
LNLDRSNLTSVPTEALSQLQSLARLRMLRLTISTLPNNAFRRLHRVRSLIISNWPVLDTV
ASNSLIGLNLTTLVISSCNLSVVPYSALRHLVYLRYLDLSYNPITVIQGNLLGDLLRLQE
LHLAGGSLLRIDPGAFRGLAYFRMLNVTSNQLSTLEENVFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRLRLNFDGHQPTCSCPDAVRQREFKDFSEKELPRLFTCRPARIMDRRPQEAR
VEEGTTVLFSCKADGDPFPSISWISSHKKVVSPTGRIRVWPNGTLEVRFAQVQDSGTYQC
LAGNAAGNDSLTVGLYVKGLPRNRTIPYFSEEGWDEPLNTEAANSSAQMAKPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHNATIDFVPRSSMGGGGEGGDGGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtcagtcgtgcgatggggggcgtggagcatcgtcttccagtttgtactg
ggtgcatccgcaggaggctgtcctccacgctgtgtgtgtcgacctgaggccaaagaactg
atctgctctggcaaacatttgaactcagtgccagagggcttttccggcgatgccaggcat
ttggatttatcccacaataagattaagactgttgggcgccggcagttttctggcctcccg
caacttcaagagttggatctcagtgataacataatctccatgattgaggtggaggctttc
caggggctgcagaacctcaggacgcttcggattaagaataaccgactcaagatcatcccc
gtcggggtgttttctggcctttccagtctgcgctttctggatttgagtcagaatgagatt
ctggtcttcctggactacaccttcaaagaaatggtgaacttgcaaacgctggaagttgag
gagaatgacttggtcttcatctcccagcgggctttttatggtctgcagaatctgcaagaa
ctcaatttagaccgcagcaacctgacctccgttcctacagaggctttgtctcagctccag
agcctggcacgtcttcgcatgctacgccttaccatttctacactgcctaacaacgctttc
agacgtctacaccgtgtgcgtagcctcatcatttcaaactggcctgtgttagacacggtg
gctagcaacagcctgatcggacttaatttgaccacgcttgtcatcagcagctgcaaccta
agtgttgttccttactcagcactgcgtcacctggtgtatctgcgctacttggacttgtcc
tacaaccccatcactgttatccagggtaatctgctaggggacctcttgagactccaggag
ttacacctagcaggcgggagtctgctacgaatagacccgggggccttcaggggactggcc
tactttcgcatgcttaatgtgacgtccaatcagctcagtactttagaggagaacgtcttc
cactctgtggggaacctgcaggtattgcggttggatgggaatcccctagcatgtgactgc
cggcttctctgggtggtccgtcgacgattgcgcttgaactttgatggacaccagccgact
tgttcgtgtcccgacgcagtaagacagcgggaattcaaagacttttcagagaaggagctc
ccaaggctctttacctgccgccctgcgcgtatcatggaccgcaggccgcaggaggcaaga
gtagaggaggggactactgttctgttctcctgtaaggctgacggggatccattcccatcc
atctcctggatctcatcccataagaaagtggtttctccaacagggcgaattagagtttgg
ccaaacgggactctggaggttcgttttgcccaagttcaggacagtggcacatatcagtgt
ctggcgggcaatgcagccggcaatgacagcctaactgtcggcttgtacgtgaaggggctc
cctcggaaccgaaccatcccttacttttccgaggagggctgggatgagcctttaaacacc
gaagctgccaactcctcagctcaaatggccaaaccatacccgtttgacgcgaagaccttg
atcatcgccaccaccatgggcttcctgtctttcctcagctcagtggccatctgttttgtc
ttcatgtttttctggagccagagcaaaggtcagatcaagcacaacgccactattgacttt
gttcctcgctcctcaatgggtggtggaggggaaggaggtgacggtggcaggttcaccatg
aaacttatttaa
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