Notothenia coriiceps (black rockcod): 104947079
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Entry
104947079 CDS
T04920
Symbol
clock
Name
(RefSeq) circadian locomoter output cycles protein kaput
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104947079 (clock)
03036 Chromosome and associated proteins [BR:
ncc03036
]
104947079 (clock)
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104947079 (clock)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104947079 (clock)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104947079 (clock)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
bHLH_IRO3
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
104947079
NCBI-ProteinID:
XP_010771323
UniProt:
A0A6I9N7B7
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MTSSIDRDDSSIFDGLMEEDEKDKAKRVSRNKSEKKRRDQFNVLIKELGTMLPGNTHKMD
KSTILQNSIDFLHKHKEIAAQSESTEIRQDWKPPFLSNEEFTQLMLEALDGFFLAIMTDG
NIIYASESVTSLLEHLPSDLVDQNLLNFLPMGEHSDVYKALSSHIMEGEALTPEYLKTNN
QLEFCCHMLRGTIDPKEPPVYEYVKFIGNFKSLNNVPNCDRNGFEGVIQRSLHSAYEDGV
CLIATVRLAKPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAEQRRELGIEEIQPEITTDKQSQDSESESQLNTTSLKEALDRFNHSR
SPSTSSHSSHKSSHTALSDPASSQVKLQGDRSTPGCQSVCAVEMTSVQRSSISSQQSMSS
QTTGQNMATSVVSQQQQQQQQPQQQQVQISGQQAMVQFSSQLEVMHSLKGQLEQRTRLIE
ANIQRQQDELRQIQDELQRVQGQSLQMFLPKGAGGLSLSSVQMDQGSTVQQGGTLSMQGQ
VVSAGLLQSSIQTQHAVQPQQQMLLREQSSALSQPQQNPLPASLYNTMMIPQQSPANVLQ
IATSLAQNTGHNTPAVATFAQDRSAQIRFPASPQLLTKLMAGQMACGAVMVPTTMFMGQV
VTAFAPQQSQTQTISISQQPPQQHHHQQQQQHHQQEQQVQQQSQVTAMQLGQAPLQQTQF
LQASRLLHGNQSTQLILQAAFPLQQQGAFTATPQQQQQQLQQQQQQQQQHHHQQKQLQQH
KQHHHHHHQQQLAPHRADSLSDRSSSQQQ
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgagcattgaccgggatgacagcagtatctttgatgggttaatggaagaagat
gaaaaggacaaagctaaacgtgtgtcccgtaacaagtctgagaagaaacgcagagatcag
ttcaatgtcctcatcaaagagctgggcaccatgttgccgggcaacacccacaagatggac
aagtcaactattttgcaaaatagcatcgactttctgcacaaacataaggagatcgcagct
cagtcagagtcaacagagatccgacaggactggaagcctcctttcctcagtaatgaagag
ttcactcagctgatgttggaggcgttggatggattttttcttgccattatgactgatgga
aatatcatctacgcctctgagagtgtgacgtccctacttgaacatttgccttcggatctt
gtggaccagaaccttctgaacttcctgcccatgggggagcattcggacgtgtacaaggct
ctgtcctctcatatcatggagggagaggcgctgacgcctgaatatctgaaaactaacaat
cagctggagttctgttgccacatgctccgagggacaatagaccccaaagagccccctgtg
tacgaatatgtcaagttcatcggaaactttaagtccctgaataatgtgcctaactgtgac
agaaacggttttgaaggagtgatccagagatcgcttcactctgcttatgaagacggagtg
tgtctgatagcaaccgtgaggctggccaaaccacagtttatcaaggagatgtgcactgta
gaggagccaaatgaggaattcacctccagacatagtttggagtggaaatttctcttcttg
gaccacagagctccacccatcataggttacctcccatttgaggtgctgggtacatcagga
tatgactactaccatgtagatgacctggagacactggccaaatgccacgaacacttaatg
caatatggcaaaggaaagtcctgctactacagattcctcaccaaagggcagcagtggatt
tggcttcagactcactactacatcacctaccaccagtggaactccagaccagagtttatt
gtctgcacacacactgttgtaagttacgctgaagtaagagcagaacagcgcagagagctt
ggaatcgaagaaatacaacctgagatcacaacagacaagcagtcccaggactcagagtct
gagtcccagctcaacaccaccagcctgaaggaggctctggatcgcttcaaccacagccgg
tcaccttcgacctcgtctcacagctcacacaaatcctcgcacaccgctttgtctgaccca
gcctcgtcgcaggtgaagcttcagggagacaggagtacaccagggtgccaatctgtctgt
gctgtggagatgacgtcagtgcaaagatcatccatcagcagtcagcagtcaatgagctcc
cagactacaggacagaacatggcaacatccgtggtttcacaacaacagcaacaacagcaa
caacctcaacagcaacaagttcagatcagtgggcagcaggccatggtgcagttctccagc
cagctcgaggtcatgcatagcctgaaggggcagcttgagcagaggaccaggctgatcgag
gccaacattcagcggcagcaggacgagctgcggcagatccaggacgagctgcagagagtg
cagggccagagcctgcagatgttcttgccgaaaggagctggcggactgagtctcagctct
gttcagatggaccaggggagcactgtgcagcagggcgggaccctcagcatgcagggccag
gtggtctctgcaggacttctacagagcagcattcaaacccaacatgctgtccagccccag
caacaaatgctgctgcgggaacagagctcagcactctcacagcctcaacaaaatccactg
cctgcgtctctctacaacacaatgatgatccctcagcagagcccagccaacgtgctccag
attgccaccagcctggctcagaatactggacacaacactcctgctgtggccacatttgca
caggaccgttcagctcaaattaggtttcctgccagtcctcagctgctcaccaagctaatg
gcagggcagatggcatgtggggccgtcatggtccccacaaccatgtttatgggccaagtg
gtgactgccttcgctccgcagcagagccagacccagaccatcagcatttcccagcagcca
ccacagcagcatcatcatcagcagcagcagcagcatcatcagcaggagcagcaggtacag
cagcagtctcaggtcacagccatgcagctagggcaggctccactgcagcagactcagttc
cttcaggcttctcggcttcttcatggaaaccagtccacccagttgatcctgcaggcggcc
ttccctctacagcagcagggtgccttcactgccacaccccaacaacagcagcaacagtta
caacaacaacaacaacaacaacaacagcatcatcatcaacagaagcagctacagcagcat
aaacagcatcatcatcatcatcatcagcagcagctggcccctcaccgggccgacagtctg
tctgaccgctcctcttcgcagcaacagtag
DBGET
integrated database retrieval system
