Notothenia coriiceps (black rockcod): 104947298
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Entry
104947298 CDS
T04920
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04144
Endocytosis
ncc04517
IgSF CAM signaling
ncc04530
Tight junction
ncc04810
Regulation of actin cytoskeleton
ncc05100
Bacterial invasion of epithelial cells
ncc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104947298 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104947298 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
104947298 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
104947298 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104947298 (arpc1a)
05100 Bacterial invasion of epithelial cells
104947298 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104947298 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104947298 (arpc1a)
Membrane trafficking [BR:
ncc04131
]
Others
Actin-binding proteins
Arp2/3 complex
104947298 (arpc1a)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
104947298 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
RMC1_N
Rax2
Beta-prop_IFT122_1st
PEP5_VPS11_N
SH3_3
Motif
Other DBs
NCBI-GeneID:
104947298
NCBI-ProteinID:
XP_010771578
UniProt:
A0A6I9N859
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MSLHQFLLEPITCHAWNSDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPVRSTILSLDWHPNNILLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QMKTEFLPLLSVMFVSENSLVAAGHDCCPMLFRCDDGGALTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSIT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcagtttctgttggaacccatcacctgccacgcgtggaacagtgacagg
acacaaattgccatcagtccaaacaaccatgaagtccatatctacaagaagagtggtaac
cagtgggttaagacccatgaactgaaggagcataatggacacataacaggaattgactgg
gctcccaaaagtgaccgtatagtgacatgtggagcagaccgtaacgcctatgtgtggtcg
cagaaggagggcgtatggaagcccaccctggtcatcctcaggatcaaccgagctgccacc
ttcgtcaagtggtctccgctggagaacaagtttgccgttggaagtggtgctcgactcatc
tctgtctgctacttcgagtctgagaacgactggtgggtgagcaagcacatcaagaagccg
gtccgctccaccatcctcagcctggactggcatcccaacaacatcctgctggcggcagga
tcctgtgactttaaatgcagggtgttctcagcctacattaaggaggttgaggagaagcca
ggccccacaccctggggcagcaagatgccatttggggctgtgctagcagagttcggagga
gcaggtggagggggttgggtccactcagtctctttctcagcctctggtaaccgactggcc
tgggtcagccatgacagcactgtcactgtggtggacagctctaagactgccagtccttca
cagatgaagacggagttccttcctctcctcagtgtcatgtttgtttcagagaacagtcta
gtagctgcgggccacgactgttgccccatgctgttccgttgcgacgatggtggagcgctg
acatttgtgtcaaagctcgacctcccgaagcagagcatccagaggaacatctccgccatg
gagcgcttcaggaacatggacaagagagccaccaccgaggaccgcaacactgcgctggac
acactgcaccagaacagcatcacgtga
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