Notothenia coriiceps (black rockcod): 104947349
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Entry
104947349 CDS
T04920
Symbol
nfatc3
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04010
MAPK signaling pathway
ncc04020
Calcium signaling pathway
ncc04148
Efferocytosis
ncc04218
Cellular senescence
ncc04310
Wnt signaling pathway
ncc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104947349 (nfatc3)
04310 Wnt signaling pathway
104947349 (nfatc3)
04020 Calcium signaling pathway
104947349 (nfatc3)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104947349 (nfatc3)
09143 Cell growth and death
04218 Cellular senescence
104947349 (nfatc3)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
104947349 (nfatc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104947349 (nfatc3)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
104947349 (nfatc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
104947349
NCBI-ProteinID:
XP_010771647
UniProt:
A0A6I9N4W9
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All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MITNHQSLGLPRHGMQPHSQFISSSPRLHSHRQGSDPPRYEAPGSKYGSSPLLPSAPVEA
PKAFECPSIQITSISPSCQQEMDANEQDLRANGPDGDYHVDRPLSRDHLYLPLDHSYRDS
SLSPSPCSSLSSRSWFSDASSCESFSHVYDDVESELNEAAARFTLGSPLTSPVCISPQTC
GGVLEEQPNWQHHHPAFVHHSHSISLSPRTSPCHSPRTSVTDENWLSPRPTSRPSSRPTS
PCGKRRHSSADICYPASLSPHHSPSPTPGPSPRGSVTEDTWIGSPSLGMSPFQCCPSEAD
IPSKTRKTSQDRTAMQTGTGEMGLDDQGNMSPNLDSPSDDGLHSLKKDGPGEQFLSVPSH
FSWNKPKPGHTPIFRTSSLPPLDWPLPSQFGQYELKIEVQPKAHHRAHYETEGSRGAVKA
SSGGHPIAKLIGYTEKPINLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIVVTST
KVLEIPLLPENNMTAGIDCAGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQPNGK
VLSLQAASIPVECSQRSAQELPQVEKFSLTSCLVSGGEEMVITGSNFFPESKVIFLEKGP
DGRPQWEVEAKIMREKTQGSCILVEVPPYHSKSVGSAVQVQFYVCNGKRKRSQSQRFTYL
SVLVKQEHREELDLSAVSPMSLPLAHAGGLVRPQLPSPEQCHPSDGLLSGSPRGLLSLQG
PCPSLGSPPFQHLPHLQSRSLHHPPADCHMTFHPTPAPLPAPPRPSYQSMQHGHSHSLPF
NGQSPLPPQCYERMPFQHSVSAASHPMGMGMVYPSSPCSSPSAPPSSNSIAGSPQSQQPM
LSPSSPRLHTLGDYHCSPNPPQMPSPGSHPLAGQHPSQLHRAMGYHPVGQRSASCPTPSS
APATRMIPSPHSGPSSPQLQSLPYQSPTSSSPTSGGSPLGPMQQQHSGQHSPQATSPVMA
SLSPVAAGPLIHPLSPQGPFPSDKERPDIKEEPEEKEPTFRSIGLQDITLDDGNVIIG
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaaccaccagtctcttggcctgcctcgtcatggcatgcagccccactcccag
ttcatcagctcctccccacgccttcactcacacagacaaggatcggatcctcccagatat
gaagccccgggctccaagtacggctcctcccctctgctgccctcggctcctgtggaggct
ccgaaggccttcgagtgccccagcatccagatcacctccatctcccccagctgccagcag
gagatggacgccaatgagcaggatctgagggccaatgggcctgatggggactatcatgtg
gataggcccctgtccagagaccacctgtacctgcctctggaccactcgtaccgggactct
tcgctcagcccgagtccgtgcagcagcctctcctctcggagctggttctctgacgcctcc
tcctgtgaatctttctcacacgtctatgacgatgttgaatcggagctaaacgaggcggcg
gcccgcttcaccctcggctcccctctgacttccccggtatgtatctcccctcaaacctgt
gggggggttttggaggagcagcccaactggcagcaccatcaccccgccttcgtgcaccac
tcccactccatcagcctgtcaccccggacgtccccgtgccactcgccacgcaccagtgtc
accgatgagaattggcttagcccgcgtcccacctctaggccctcctcacgtcccacctca
ccctgtgggaagaggcgccactccagcgctgacatctgctaccccgcctccttgtctcct
catcactcaccctcacccacaccaggaccttcacccaggggcagcgtgacggaggacaca
tggatcggcagtccttctttaggcatgtctcccttccagtgctgtccatcagaggcagac
atcccgtccaagacgaggaagacgtcgcaggacagaacagcaatgcagactgggacaggg
gagatggggctagatgaccaaggaaatatgtctcctaatctagactctccttctgacgat
ggtctccacagtctgaagaaggacgggcccggggaacagttcctctcagtgccctctcac
ttctcatggaataaacccaaacctggtcatacgcccatattcaggacctcctcactgcct
cctctggactggccgctaccgagccagtttggccagtatgaattgaagatagaagtgcaa
cccaaagcccaccaccgagcgcactacgagaccgagggcagccgaggagccgtcaaagct
tcttccggtggccacccgattgccaagctcattggctacactgagaagcccatcaacctg
cagatgttcatcggaacagcagacgaccgctacttgaggccgcacgccttctaccaggtg
caccggattaccgggaaaactgtagccacggccagccaagaaattgtagtcaccagcacc
aaagttctcgaaattcctctcctgcctgaaaacaacatgacagccggcatcgactgtgct
ggcatcctgaagctgcggaactcagacatcgagctgcggaagggggagacggatatcgga
aggaagaacacacgggtccgcgtggtcttccgagtccacatcccacaacccaacgggaag
gtgctctctctgcaggccgcctctatccctgtggagtgctcccagcgttcggctcaagag
ctgccccaggtggagaaattcagcctgaccagctgtctggtcagcgggggagaagagatg
gtcatcaccggctccaacttcttcccagagtccaaggtcatcttcctggagaaaggccct
gatggacgaccacagtgggaagttgaggcaaaaataatgcgtgagaaaactcaaggatcg
tgcatccttgtggaggtccctccctaccacagtaagtctgtgggctcagctgtgcaggtg
cagttttatgtctgcaatggcaagcggaaaaggagccaatcgcaacgcttcacttacctg
tcagtgttggtgaaacaggagcacagagaagagctggacctctctgccgtctcccccatg
tccctccccctggcccatgctggcgggctggtgcgcccccagctgccctctccggagcag
tgccacccatcggacggccttctgtccggctccccccgcggcctgctctccctgcagggc
ccctgcccctccctgggctccccgcctttccagcacctgcctcacctccagagtcgcagc
ttgcaccacccccccgcagactgccacatgacgttccacccgacccctgctcctctccct
gcgcccccccggccttcctaccagtccatgcagcacggccacagccacagcctgcccttc
aacggccagtccccactcccccctcagtgctacgagaggatgcccttccagcacagcgtc
tctgcagcgtctcacccgatggggatggggatggtgtacccttcctccccgtgctcctca
ccatcagctcccccctcctcaaacagcatagctgggtctccccagagccaacaaccgatg
ctctccccctcatccccacgcctgcacacactcggagactatcactgctccccaaacccc
ccccagatgccctctcccggcagccaccccctcgcggggcagcacccctcccagctgcat
agagcgatgggctaccaccccgtgggtcagaggtcagcctcctgtcccaccccgtccagc
gcccctgctaccaggatgatcccctctccccactcagggccttcctcccctcagctccaa
tcgctgccctaccagtctcccacctcctcctcccccacatcaggtggcagtcctctgggg
cccatgcagcagcagcactcaggtcagcactccccccaggccaccagcccggtcatggcc
agcctctccccggtggcagcggggcctctgattcaccctctgagcccacaaggacccttc
ccctcggacaaagagaggccggacatcaaagaggagcccgaggagaaggagcccaccttc
cgctccatcggcctacaggacatcacgctggacgatggtaatgtaatcatcggctga
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