Notothenia coriiceps (black rockcod): 104947498
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Entry
104947498 CDS
T04920
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104947498
Cell adhesion molecules [BR:
ncc04515
]
Cadherins
Protocadherins
104947498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RibLong
FctA
TMEM154
Motif
Other DBs
NCBI-GeneID:
104947498
NCBI-ProteinID:
XP_010771835
UniProt:
A0A6I9NBY9
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MKLLTKGKITTEMIRGKCIIYWHRWIFLFLIHQFLFASLVQSEGNTIRYQSYEEDAPGTV
IGNLAKDMSLSLSHSSKTNFRMMKQFNDSFIRVRESDGELTVGERIDRERICRHTPQCLI
TFDVVHFSKERYRLIHVEVEIKDINDNSPEFPNKESVVEISENAAVGSRIPLDPAADADV
GSNYIQSYQISVNSHFTIDVLLRADGVKYAELVLMKELDRETQSSYTVELVATDGGNPYR
SGSTKITIKVTDFNDNSPVFDQNSFSVSLPEDAPVGAVILDLNAVDADEGLNGEVAYGFG
KQVSHEIRELFQVDNKSGRLTLRSPVDFEDKSTYELDVQATDLGPNPTPSVCKIIIHVTD
VNDNAPEISITPMTSISTGIAYISESAEKDSLVALISTLDRDSGVNSQVHCTLYGHDHFK
LRQAYEDSYMIVTAAALDRERISEYNLTVMAEDFGSPALRKITQYTIRLTDENDNAPHFT
KAVYEVSVVENNAPGAYITTVQASDADLDNNGKITYRLVDSVIMGSPVNTFVSLNSVSGS
IYALRSFNYEVMKLLDIHIKASDGGSPQLQSTAVIRLKIVDQNDNQPSIIEPPLYKGSAE
IFLPKDAPAGYVVTQIKATDADEGINAQLSYKITDGGHLGFSVNKDTGKVHVSRQLTYDL
TDNVKVTVAVSDNGSPTLSSTAIIHFSFIEGTVPSMPSLAQNGNVELFEWDMSIAIIIVL
AGSCSLLLLAIILITTICSRRKKETRDDDKEDIPNVENVESGHVDSLIANHNGKVFDAHP
FPENPPLASSNTTETGCEDGRPAAGIFESNSRVMEGKLKGYSTLPGYGKETVRPITIWKG
NSFTTISARDPHISGKDSGKGDSDFNDSDSDISGDVHKKESPPTNSLWACTSECKVLGHS
DRCWSPSATRPNTSMACGPHLSTFSKTASLPRNTGRENYYPALLPKTNALQSVYEKVQHQ
EFDYILVGPQTPARIQETDEMSIPEYTNS
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcttaccaagggaaagattactacggagatgatacgaggaaaatgtataatt
tattggcaccggtggatttttttatttttaatccatcaatttttatttgcctcactggtt
cagtccgagggaaatactattcgttaccagagctatgaagaggacgcaccaggtactgtc
atcggaaaccttgccaaggatatgtccttgagtctgtctcattcctccaagaccaatttc
aggatgatgaaacaattcaatgattcattcatcagggtaagagaaagcgacggggaactc
actgtcggggaacgaattgacagggaaagaatctgcaggcacactccacagtgtctcatc
acttttgacgttgtacatttctccaaagagcgctacagattgattcacgttgaggtagaa
ataaaggatatcaatgacaactctccggagtttccaaacaaggaatctgtagtggagatc
tcggagaatgcagcagtggggtcccgtatccctttagacccagccgcagacgctgatgtt
gggtcaaactacatccaaagctatcaaatttctgtcaacagtcatttcaccattgatgtg
ctcctgagagcggatggggttaaatatgcggaattggtgctaatgaaagagctagacagg
gagactcagtcatcatacactgtggagctggtcgccacagacggtggaaacccttacaga
tcggggtcaacaaagataactatcaaagtcactgactttaatgataatagtcccgttttt
gaccagaatagtttttcagtcagtttgccagaggacgcaccggttggcgctgttatactg
gacttgaacgcagttgatgcagatgagggtttaaacggagaggtcgcctacgggttcggg
aaacaggtttctcatgagatacgagaactttttcaagtggataataaatcaggtcggctg
acactccggagccctgtggattttgaggacaaaagcacatatgagctagacgtgcaggcg
actgatctgggaccaaacccaaccccctccgtgtgtaaaatcataattcacgtcacagac
gttaatgacaatgccccagaaatcagtatcaccccaatgacctccatctcgactggcatt
gcatacatcagtgagtctgcagagaaggacagtctggtggcgctgatcagtaccctggat
agagactcgggtgttaacagccaggtccactgcacgttatacggccacgaccatttcaaa
ctccgacaggcttacgaggacagctacatgatagttacagcagcagccctagacagggag
aggatcagtgagtataacttgacggtcatggctgaggattttgggtcacccgcgctgaga
aagatcactcagtacaccattaggctcaccgacgagaatgacaacgcccctcactttact
aaagctgtctatgaagtttcagtggtggaaaacaacgccccgggcgcttatatcaccaca
gtgcaagccagcgacgcggatctggacaataatgggaaaattacttacagacttgtggac
agtgttatcatggggtccccagtgaatacctttgtgtctcttaattcagtgtctggctcc
atatatgcactgaggagttttaattatgaggtgatgaaactgctagacatacatatcaaa
gcaagtgatggggggtcaccacagctgcagagcacagctgtcatccgactaaaaatagtt
gatcagaatgacaaccaaccatctatcatagagccccccctttacaaaggatctgctgag
attttcctgcccaaagatgcacctgcaggatatgttgtaactcagataaaggccacggat
gctgatgagggtattaatgcacagctgtcctataaaattacagacgggggtcacctggga
ttctctgtcaacaaagacacagggaaagtgcacgtgagcagacagctgacgtatgatctc
acagacaatgtcaaagtcacagtggcggtcagtgacaatggatccccgacactctcctcc
acagccattatacacttcagctttatagaaggaaccgtacccagtatgccttccttggct
caaaatggcaacgtggagctttttgaatgggacatgtccatagccataatcattgtcctg
gcagggagctgctctctcctcctgctggctatcattctcatcacaaccatttgcagccgc
cggaaaaaggagacaagggatgatgataaagaagacataccaaatgtggagaacgtggaa
agtggtcatgttgattcattgattgccaaccacaatggaaaagtgtttgatgcccatcca
tttccagagaaccctccattggccagcagtaacacaacagagacaggctgtgaggatggc
aggccagcagcaggcatctttgagtcaaacagcagggtgatggagggtaaattaaagggt
tattctacgctaccgggctatgggaaagagacagtcagaccgataactatatggaagggt
aattcattcacaacaatctcagcaagagatccccacatcagtggcaaggacagtggaaaa
ggtgacagtgacttcaatgacagtgattctgacataagtggagatgtgcacaaaaaagag
tcgccgccaacaaacagtctctgggcatgtacaagcgagtgcaaagtgttgggacactcg
gaccggtgctggagcccttcggctacaaggcccaacacgagcatggcatgcggaccgcat
ctgtcaactttcagcaagactgcttcacttccaaggaacaccggaagggaaaactactac
ccagctctcctacccaaaaccaacgcgctgcaaagtgtgtacgaaaaagtccaacaccaa
gaatttgactatattctcgttggtccacagacaccagccagaatacaagagacagatgag
atgtccattccagagtacacaaactcttaa
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