Notothenia coriiceps (black rockcod): 104947637
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Entry
104947637 CDS
T04920
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104947637 (sbno1)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104947637 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104947637
NCBI-ProteinID:
XP_010771990
UniProt:
A0A6I9NCC9
LinkDB
All DBs
Position
Unknown
AA seq
1405 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDFGFFDVDPQDVAQPSTTQQSISISALEGGMGTESVDVFR
NNPPVPVPIVTIRHKPQPSTTTFVLNQLNQLPSLGAAVTKQSVTNPIKHTITVTKVVHVS
NSALRGTSTLSSTSTPSSAPTVVPSNRDQQIQLKDLLRTGNVRSTGLKGNSLMELMRLKP
PSNIAPPVATATSTAEMLNGIKKEVFGKESPRIWMNEDVKMQPFSHSMIQKIPGMKEEDE
PEEEEEDELGVVETYAEYMPMKLKIGLRHPDPVVETSSLSSVNPPDVWYRLSISEEVIDR
GCLSALQLEAITYAAQQHETFLPCGDRAAYLIGDGAGVGKGRTVAGIIYENYLLGRKRSL
WFSVSNDLKYDAERDLKDIGAKNISVHSLNKFKYGKITSKHNGSVKKGVIFATYSSLIGE
SQSGGKYKTRFQQLLHWCGEDFDGVIVYDECHKAKNVCPVGSSKPTKTGLAVLELQNKLP
KARVVYASATGASEPRNMAYMNRLGIWGLKTPFREFNNFIQAVERRGVGAMEIVAMDMKL
RGMYIARQLSFTGVTFKIEEVPLTPQYIKMYNKSVKLWVLAREKFQAAANLMDAEQRMKK
SMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVANGKCVVIGLQSTGEARTLEALEEGG
GELNDFVSTAKGVLQSLVEKHFPAPDRQKLYTLLGIDLSAKKTPSPIEPAAQPEQKGKKR
KGSDVKKQPKKKPRKHGGLSGTSSEESQSEESDRESGKESDDSFKSVSSGDEDDDFNPFR
DESDDDDEDDPWLIRKEPKKGKEKKKKKRRKSVDPDCIQSALLASGLGSTRPAFTAPVAP
PSATAIVKAESQDSCLTSEDAVDNAQKMKRDLLEQLDELAEDLPPNTLDELIDELGGPEN
VAEMTGRKGRVVSNDDGTITYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGI
SLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFA
SIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVKLDSPLVPPPST
FRGDFFKEIQTGLIGVGIINLDERFGAMILDKDYNNMGKFLNRILGMAVQQQNALFQYFS
DTLAAVIQEAKKSGRYDMGILDLGNGDEKVKKVDCKKFLTPGYTTAGHVELYNVSVERGM
SWEEATHVWADQNGGDDGFYVQMRNNKKTAILVKEVNPKKRLFLVYRPNTGRQVKLETYA
DIKKKFKKVMSDDAKQHWMDQYLSSAKICSHAFWRGNCKKASVGLLCEVGLRCRTYYVLC
GSVLSVWNELEEVLTPLSGTNVKVQIVRLRTEDGQRIVGLIIPVNCVNALINKLSTSDQS
QQLAVQELQKRQQLHPQSLSQAPNT
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaggatttactcctcgctgccctgagtgagagtggcatttgtccaaat
gattttggcttttttgatgttgatcctcaggatgttgcacagccctccacaacccagcaa
tctatctccatcagtgccctggagggtggtatggggacagagtcggtggatgtttttcga
aataatcctccagttccagtaccgattgttactatcaggcacaaacctcagccatcaacc
accacgtttgtcttaaatcagctgaatcagttgccgtcactaggagctgctgtgaccaaa
caatcagtaacaaatcccatcaaacataccataactgtcaccaaagtggtccatgttagt
aattcagctttgcgaggaacttcaaccctatcctctacaagtaccccttcttcagcgccg
acagtagtgccttctaacagagatcagcaaattcagctgaaagacctcctccgaactggc
aatgtgaggagcactggtcttaaagggaacagtttgatggagctcatgagactgaagcct
ccatctaacatcgctccaccagtagcaacggcaacctcaacagctgaaatgctcaatggg
atcaagaaagaagtatttggtaaagagtctcccaggatctggatgaatgaagatgttaaa
atgcagcccttctcacattcaatgatacagaaaatcccagggatgaaggaggaggatgag
cctgaggaggaagaggaggacgagttgggtgttgtagagacttatgcagagtacatgcca
atgaaattaaagattggcctgcggcatccggatcctgtggtggagaccagctccctgtcc
agtgtcaaccctccagatgtgtggtacagactgtccatctcagaagaagtcattgatcgt
ggctgcctgtctgcactgcagctggaggcaattacatatgctgctcagcaacacgagaca
ttcctcccctgcggtgatcgagctgcatatttgatcggagatggggcaggtgtggggaaa
ggccggaccgttgcaggcatcatctatgagaattaccttttaggcagaaagagatctctt
tggttcagtgtctctaacgacttgaagtatgatgcggaaagggatttaaaggacatagga
gccaaaaacatctcggttcattcattgaacaagttcaaatatggaaaaatcacatcaaaa
cacaatggcagtgtgaagaaaggtgtgatattcgccacttactcctccttgatcggagag
agccaatcgggagggaaatacaagaccagatttcaacagcttctccactggtgtggggag
gactttgacggagttattgtgtatgacgagtgtcacaaagccaaaaatgtatgtccagtt
ggatcatcgaaacctacaaaaactggtcttgctgtgttggaactgcagaacaaactccct
aaggctcgcgttgtgtatgcaagtgctacaggtgcctctgaacccaggaatatggcctat
atgaatcgtctgggcatctggggactaaaaacacctttcagagaatttaacaactttatc
caagcagttgagcgcagaggtgttggtgccatggaaatagtagccatggacatgaaactg
aggggaatgtacattgcaaggcagttgagttttacaggagtgacctttaagatcgaggag
gttcccctgactccgcagtacatcaagatgtacaacaaatctgtcaagctgtgggtgctt
gcacgagagaagttccaggcggcagcgaacctgatggatgcagagcagcgcatgaagaag
tccatgtggggccagttctggtctgctcaccagaggttcttcaaatacctctgcatcgcc
tccaaagtccgcagagtggtgcagctcgctcgagaggaggtcgcaaatggaaagtgcgtg
gtgatcggccttcagtccactggagaagccagaacacttgaggccttggaggaaggagga
ggagagctcaatgactttgtgtcgactgcaaaaggtgtgctgcagtccctggttgagaag
cactttccagctcctgacagacagaagctttacactctgctaggtatcgacctctcagct
aagaagaccccctcacccattgagcctgcagcacaaccagaacagaagggcaaaaaaagg
aaaggttcagatgtcaaaaagcagccgaaaaagaagcctcgcaagcacggtggtttgtct
ggtaccagctcggaggagagccagtcggaggagtcagacagagagtctggtaaagagagt
gacgacagcttcaaatctgttagctcgggggacgaagacgatgatttcaacccattcaga
gacgagtctgatgacgacgatgaagatgatccatggctgatcagaaaagaaccaaagaaa
ggaaaggagaagaagaagaaaaagagaaggaagagtgttgatcctgactgcattcaaagt
gccttgttagcctccgggctggggtccaccaggcccgctttcaccgcccctgttgccccc
cccagcgcgactgccattgtcaaggcagagagtcaggatagctgcctaacaagtgaagac
gcagtggataatgcccagaaaatgaagagagatctgttggaacaacttgatgagctcgct
gaggatctgcctcccaataccctggatgagctcatagatgaactgggaggacccgagaac
gtagctgagatgactggccgaaaaggtcgcgtggtcagcaatgacgacggcaccatcaca
tatgaatcccgctctgagctggatgtcccggtggaaatcctcaatctcaccgagaagcaa
aggttcatggatggagagaagaacatagccatcatctcggaagctgccagctctggtata
tccctgcaggccgatcgtcgagtgaagaaccagcggcggagagtccacatgacgctggag
ctgccgtggagcgcagacagagccatacagcagttcgggagaactcacagatcaaaccag
gtcacggctccagaatatgtcttccttatctcggagctggcaggagagcagagatttgca
tccatcgttgccaaaagactagaaagcctgggtgctctcactcacggagacagaagagca
acagaaacccgagatctcagccggtttaattttgacaacaaatatggccgaaatgctctg
gagattgtgatgaagtccatcgtgaagctcgattctccattagttcctccaccaagtact
tttagaggagatttcttcaaagaaattcaaaccggattaataggtgtgggcatcatcaat
ttggacgaacgatttggcgcaatgatactggacaaagattacaacaacatggggaagttc
ctgaaccgtattctgggcatggcggtccagcagcagaatgccctgttccaatacttttct
gacacactggctgcagttattcaggaagccaagaagagtggcagatatgacatgggcatt
ctcgatctgggcaatggtgatgagaaggtgaagaaggtagactgcaagaaattcttaact
ccaggatacaccacggcaggacatgtagagctgtacaacgtgagtgtggagagggggatg
tcctgggaggaagccacgcatgtctgggcggatcagaatggaggggatgatggcttctat
gttcagatgaggaacaacaagaaaacagccatactggtcaaagaggtgaaccccaagaag
aggctcttcctggtttacaggccgaacaccggcagacaggtcaaactggagacgtatgca
gacatcaagaaaaagtttaaaaaggttatgtcagatgacgccaagcagcactggatggac
cagtacctgtcgtcagcaaagatctgctctcatgcattttggcggggtaactgtaagaaa
gcctcagtgggtcttctgtgtgaagttggactccggtgtcggacgtactatgttctgtgt
ggctcagtgctcagtgtgtggaacgagctggaggaagtgctcaccccgctcagtggaacc
aatgtgaaggtgcagattgtccgcctcagaacagaagatggacagaggatagtcggactg
atcattccagtgaactgcgtgaatgcattaatcaacaaactctcgacgtcggaccagagc
cagcagctcgccgtgcaggagctgcagaaacggcagcagctccacccccaaagtctcagc
caggcccccaacacatag
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integrated database retrieval system
