Notothenia coriiceps (black rockcod): 104947811
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Entry
104947811 CDS
T04920
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104947811 (tfip11)
Spliceosome [BR:
ncc03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104947811 (tfip11)
Other components
Complex C specific factors
104947811 (tfip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
104947811
NCBI-ProteinID:
XP_010772216
UniProt:
A0A6I9NCV4
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MSMSHLYGRREEEEEGVEVESFEVTDWDLANEFNPGRQRHRPTKDQATYGIWADRDSDED
ERPSFGGKNSKDYTAPVNFVSAGLRKSAAEEKQQKAEGGSDDSEDEGPSAPPPPPRSTAP
KKLQMGTFRGNQPQRFAGGIQSGKGLGTWEKHTRGIGQKLLQKMGYQPGKGLGKNAQGII
NPIEAKLRKGKGAVGAYGNERTKQSLQDFPTVDSEEEEEKEFQKELGQWRKDPAGSVGKK
KPKYSYRTVDELKSKGKLAGRTTAVSAGEMAQVKVIDMTGREQKVYYSYSQMTNKHSVPD
EGPPSLSTQDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESRAL
HSRLEAEQDSIQRIEAVLELVGRFPSGEMAPGEEGPSLQECARIFETLQTDYYEEYKTMG
LADLAVAVVQPLLKDKLRSWDPLKDSSYCLEDIGQWRAILESRDFHSSAPDSNMDPYHRL
LWEVWISVMRPCVTAWQPRNVGPMVDCVELWAPILPLWILDHLMEQLILPRLQREVDTWN
PLTDTVPIHSWIHPWLPLLQARLEPLYPPIRSKLSNALQRWHPSDTSARLILQPWKDVFT
PGAWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLDKNFFT
KWLQVLCSWLSNSPNYEEITKWYLGWKTMFSDALLTQPLIKDKFNEALDIMNRAVSSGMG
GYMQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGISSGVPTNFKDLIQAKAEE
NNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatctatatgggaggcgggaggaggaggaggaaggtgtggaggtggag
agctttgaggtgacagactgggacctcgccaacgagtttaacccagggcgtcagagacat
aggccgaccaaggatcaggccacctacgggatctgggctgacagagactcagacgaggat
gagaggcctagctttggtggcaagaactccaaagattacactgctccagtaaactttgtg
agtgctggactgcgtaagtctgcagcagaggagaaacagcaaaaagcagaaggaggctct
gatgactcagaagatgaaggtccttcagcaccaccacccccccctcgcagcactgcaccc
aaaaaactccaaatgggtactttccgggggaaccagccccagaggtttgcaggtggcatt
cagtctgggaaaggccttggtacctgggagaagcatacgaggggaattggacagaaactt
ctgcagaaaatgggataccaaccaggcaaaggactgggcaagaatgctcaaggtatcata
aacccaattgaggcaaaacttcgtaaaggaaagggagcagtgggtgcctatggcaatgaa
cgaaccaagcagagtcttcaggactttcctaccgttgactcagaggaagaggaggaaaag
gagtttcagaaggagcttggccagtggcgtaaggatccggcaggctctgtaggaaaaaag
aaaccaaagtactcctacaggactgtggacgagctaaaatctaaaggcaagctggcagga
cgcactacagccgtatccgctggggagatggcacaggtcaaggtcatagatatgactgga
agagaacaaaaggtatattatagttacagtcaaatgaccaacaagcacagtgttccagat
gaaggtccaccaagcctctccactcaggatcagaagggatctggctttgctctccctgaa
cttgaacataacctgcagcttctgatagacctcacagaacaagacatattacagtccgcc
agacgtctgcagcatgaaaaagatgtagttgtgtctctgagccatgagtcacgggcactg
cacagcagactggaggcagagcaagattccatccagagaatagaggccgttctggaattg
gtggggcgttttccttctggagagatggcacctggcgaggagggacccagcctgcaggag
tgtgcccggatctttgagactttacaaacagactattatgaagaatacaagacaatggga
ttggcagacctggctgtagcggttgtacagccattactcaaggacaaacttcgctcctgg
gaccctttgaaggacagctcctattgtctggaagacatcggtcagtggagagcaatcctt
gaatctagagacttccacagtagtgccccagattcaaacatggacccttaccacaggctg
ttgtgggaggtgtggatctcagtgatgcggccctgtgtgacggcctggcagcctcgtaac
gtggggccaatggtggactgcgtggagttgtgggctcctatactccctctgtggatcctg
gatcacctgatggagcagctgatcctcccccggctacagcgagaggtggatacctggaac
cctttaactgacacagtgcccatccactcctggatccatccttggttgcctcttctacaa
gcacgtctagagcctctttacccaccaatcaggagcaaactatccaatgccttgcagcga
tggcatcccagcgacacttcagcccgcctcatcctgcaaccttggaaagatgtttttact
ccaggtgcatgggaggccttcatggtgaaaaatatcatccctaaactagctctgtgtctg
gaggagctggttatcaaccctcaccagcagcagatggagccatttcactgggtgatggac
tgggagggcatgttatccccctccagcctggtgtcgctgctggacaaaaacttcttcaca
aagtggttgcaggtcttgtgctcatggttgagcaacagtcctaactacgaggaaatcaca
aaatggtacctgggttggaaaaccatgtttagtgacgccttgttaacacagcccctcatt
aaagacaaattcaacgaagctttggacatcatgaaccgcgcagtgtcttcaggcatgggt
ggatacatgcaacctggtgcaagagagaacattgcatacctcacacagacggagaggcga
aaagacttccagtatgaagcgatgcaggagcgtagagatgcagagagtgtggctcacaga
ggaatcagctcgggtgtgccaactaacttcaaagatcttatccaggcaaaggcagaggag
aacaacattgtctttatgcccttagtggctaaacggcacgagggcaaacagctgtacacc
tttgggcgtattgtcatctacatcgacagaggggttgtgtttgtgcaaggagagaaaact
tgggtccccacgtctttgcagagtctgatcgatatggccaagtga
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