Notothenia coriiceps (black rockcod): 104947866
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Entry
104947866 CDS
T04920
Name
(RefSeq) epiphycan-like
KO
K08127
epiphycan
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ncc00535
]
104947866
Proteoglycans [BR:
ncc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
104947866
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
104947866
NCBI-ProteinID:
XP_010772281
UniProt:
A0A6I9ND20
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All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
FVPFKCKCISTVSLFLAAHGEQIEVGTVAPDPPSAASLPTAEYHEEELTLPPAPVTLDFK
GPGLFGPDTGVGMPTCLLCVCIGGSVYCDDTGLDQIPLLPKDTTHFYGRFNNIRHVKNTD
FNYLNQLQSIDLTGNQISGMDEDVFLSLPQLHQLLLADNNLQSMPELPITMKYIDVHNNR
LISNGVHSEGFKDMSQLEFLYLSDNKLDYIPVPLPLGLRVLHLQNNNIQTLYEDSFCNSH
DRHFTRRNLEDIRLDGNPLNIQLFPQAYVCLLRLPVGSH
NT seq
842 nt
NT seq
+upstream
nt +downstream
nt
tatttgtaccattcaaatgcaaatgtatttcaacggtctctctcttccttgctgcccatg
gagaacagattgaggtgggcaccgtagctccagaccccccctctgcagcaagcctgccca
cagctgagtaccatgaggaggagctgaccctgcccccagctcccgtcactctggacttca
agggaccgggtctctttggccctgatactggcgttggtatgcccacctgcttgctgtgtg
tgtgtattggtgggagtgtgtactgtgatgacacaggcctggatcagatcccactccttc
ctaaagacaccacccatttttatggccgcttcaacaacattcgacatgtcaagaacacag
actttaactacctcaatcaactccagtccattgatctgacagggaaccagatttcaggga
tggatgaggatgtgtttctgtctctgccgcagcttcaccagttgctgctggctgataaca
acctgcagagcatgcctgagctgccaatcaccatgaaatacatcgatgtacacaacaacc
gtctgatcagtaatggggtacattctgagggattcaaggacatgagccagctggagttcc
tctatctgtctgacaataaactggattacattcctgtaccactaccactgggtctgagag
ttttacacctgcagaataacaacatccagactctgtacgaggactccttctgtaacagcc
atgatcgccacttcacccgccgtaacctggaggatatccgcctggacggcaaccccctaa
acatccagctatttccccaggcctacgtctgcctgctccgcctgcctgtagggagccact
ga
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