KEGG   Notothenia coriiceps (black rockcod): 104947906
Entry
104947906         CDS       T04920                                 
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04137  Mitophagy - animal
ncc04144  Endocytosis
ncc04145  Phagosome
ncc04148  Efferocytosis
ncc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104947906
   04145 Phagosome
    104947906
   04137 Mitophagy - animal
    104947906
   04148 Efferocytosis
    104947906
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104947906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104947906
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncc04147]
    104947906
   04031 GTP-binding proteins [BR:ncc04031]
    104947906
Membrane trafficking [BR:ncc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    104947906
 Endosome - Lysosome transport
    104947906
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104947906
  Exosomal proteins of other body fluids (saliva and urine)
   104947906
  Exosomal proteins of colorectal cancer cells
   104947906
  Exosomal proteins of bladder cancer cells
   104947906
GTP-binding proteins [BR:ncc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    104947906
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 104947906
NCBI-ProteinID: XP_010772324
UniProt: A0A6I9N351
LinkDB
Position
Unknown
AA seq 216 aa
MASRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
KLPKNEPQAAGASGGRNRGVDLTETAQPTSRSCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaagtagaggcggagctacgcgacccaatgggccaaatgctggcaacaagatctgc
cagttcaaacttgtgcttttaggggagtcggccgtggggaagtcgagtctcgtgcttcgt
ttcgtcaagggacagtttcatgaattccaagagagcacaatcggagctgccttcctgact
cagacggtatgtttggacgacacaacagtcaagtttgaaatctgggacacagctggtcag
gagcgctaccacagtctggctcctatgtactacagaggtgcccaggcagccattgtggtg
tatgatatcacaaatgaggagtcatttgtacgggcgaagaactgggttaaagagctgcag
agacaagctagtccaaacattgtaatagctctggctgggaacaaggctgatctcgcaaac
aagagagcactggacttccaggacgcacagtcatacgcagatgataacagcttgcttttc
atggaaacatcagcaaagacctctatgaacgtcaatgagatattcatggccatcgcgaaa
aagctacccaagaatgagcctcaggcggctggcgccagcggcgggcggaaccgaggagtg
gacctgacggagacggctcagcccaccagccgctcctgctgcagtaactaa

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