Notothenia coriiceps (black rockcod): 104948028
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Entry
104948028 CDS
T04920
Symbol
polm
Name
(RefSeq) DNA-directed DNA/RNA polymerase mu
KO
K03513
DNA polymerase mu [EC:
2.7.7.7
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104948028 (polm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104948028 (polm)
Enzymes [BR:
ncc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104948028 (polm)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
104948028 (polm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
DNA_pol_B_palm
HHH_8
NTP_transf_2
BRCT
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
104948028
NCBI-ProteinID:
XP_010772477
UniProt:
A0A6I9NAX2
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MVPLKRRKVSSGAGKTGDTWSGVPAKFPQVLLFLLERKMGASRRAFLSQLGQKKGFQVEE
LFSESVTHVISENNSGDEVRMWLGSQIGGQCRTPALLLDISWYTESMKEGHPVEILDRHK
LQEQQVDESKEVESIVPSYACQRRTTLENHNTVFTDALSLLAESAELSDEDGRGVAFRRA
AAVLKALHSPVTDLLQLRGLPCLGGHSLRVIKDVLENGASSEVECTKQSERFKALKVLTG
IFGVGSKTAERWIREGIHSLPQLQDSAHTLNRAQQAGLEHYDDLNQPVTKAEGDAIGEIV
AKAVMSVLPGVQITLIGGFRRGKLTGHDVDFLITHPEEGREVGLMPKVVSWLESKGFLLY
QKTTRNSYLESKDGPARPSSNMDRFERCFSIFKLPEDAKQGTTQTETLTEDTPEDTCRLT
TPSLVKDEGSESTKRANLKPWRAVRVDLVVSPISQFAFALLGWTGSKLFERELRRWAGHE
KAMSLSSHALYDNTQSKYLRASSEEEIFAHLGLEYIPPSERNA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgttgaagagaaggaaagtctcctcaggtgctgggaaaactggggatacttgg
agtggagtacctgccaaattccctcaggtgcttttattcctgttggaaaggaaaatggga
gccagtcgaagagcatttctctctcagctcggtcaaaagaaaggatttcaggtggaggag
ttgttcagtgagagcgtcacacatgtgatttctgagaataactctggagatgaggtcagg
atgtggctaggctcacagattggaggtcagtgcaggacaccagctctccttctggacatc
agctggtacacagagagcatgaaggagggacatcctgttgaaatcctggacagacataaa
ctacaggagcaacaggttgatgaatcgaaggaggtggagagtatcgtaccgagctacgcc
tgtcagagaaggaccactctggagaaccacaacaccgtcttcactgatgcgctgtctctc
ctggctgaaagcgctgagctcagtgacgaggacggacgaggcgttgcgttccgacgagcc
gccgccgtgctgaaggctctccacagcccggtgacagacctgctgcagctcagagggctg
ccctgtctcggaggacattcactcagagtcatcaaagacgttttggaaaatggagcatcc
agtgaagtggagtgtacaaagcagtcggagcggtttaaggcactgaaggtgttaacgggt
atttttggggttggatcaaaaacagccgagagatggatcagagaggggatacacagcctt
cctcagttacaggactccgcacacacactcaatagagctcaacaagcaggtctggagcac
tatgatgacctcaaccagccggtcactaaggcagagggtgacgccatcggagagattgtg
gctaaagctgtcatgtctgtgttgccaggggtacagattactctgataggaggtttcagg
agagggaagctgacaggccatgatgtggacttcctgataacacacccagaggagggcaga
gaggtggggctgatgcctaaagtcgtgtcctggttggaatcaaagggtttcttgttgtac
cagaaaactacaagaaactcttacctggagtcaaaggacggtcctgctcggccttcctcc
aacatggaccgcttcgagaggtgtttctccatctttaaactgcctgaggatgcgaaacaa
ggaacaacacaaacagagacactgacagaagatacacctgaggacacgtgtcgtcttaca
accccctcgttggttaaagatgaaggaagtgagtcgacaaaacgtgccaatctcaaacca
tggagagcggtcagagtggacctggtggtgtcgcccatcagccagtttgcttttgctctg
ctgggctggaccggatcaaagttgtttgagagagagctgcgacgctgggcggggcacgag
aaggccatgtctctgagcagccacgctctgtacgataacacacagagcaagtacctgaga
gcttcatcagaggaggagatttttgctcatctcggtctggagtacatccctccgtcagag
agaaacgcctga
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