Notothenia coriiceps (black rockcod): 104948037
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Entry
104948037 CDS
T04920
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 2-like isoform X1
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104948037
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
PH_11
IQ
Motif
Other DBs
NCBI-GeneID:
104948037
NCBI-ProteinID:
XP_010772491
UniProt:
A0A6I9NDJ8
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MQKGVRYNEGHALFLSVVARKEGSKRGFLSKKTTENSRWTEKYFALYQNVLFYFENDQSS
RPSGIYLLEGCTCERAPAPKVSAISKEPVEKQQHYFLVVFGHDGQKPLELRTEEESDCNE
WVESVQQASYSDIIIEREILMQKYIHLVQIMETEKIAANQLRTQLEDQDTEIERLKAEIV
MMNKTKERMLPYHNNQEEEDPDIKKIKKVQSFMRGWLCRRKWKIIVQDYISSPHAESMRK
RNQIVFNMVEAETEYVHQLSILVNCFLRPLRMAASSKKPPINHDNVSTIFLNSETIMFLH
EIFHQGLNARIANWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQVLANCKQNRDFDKLL
KQYESNAACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVERKSLEFAKSKLEELS
KMMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFVRQGSLIQLPSSSERGMLSKVRL
GSLSLRKEGERQCFLFTKHFLICTRTSGGKLHLLKQGGTLSLIECTLIEELEANDEDYNA
AGQGFNHLEFKVVVEPPDGQAFSVVLLAPSRQEKAAWTSDISQCIDNIRCNGLMTSVFEE
NSKVSVPHMIKSDARLHKDDIDICFSKTLNSCKVPQIRYASVERLLERLTDLRFLSIDFL
NTFLHTYRIFTTAAVVIDKLADIYRKPFTSIPVRIERLSCDRLSIMSLCPDYSLKITQLA
LDQSKSLELFFATNQGSWGTDPLNNKSPRLIRKFSSPPPLTLSSRTSSPVHCRKLSLNCP
ISGKPGVLDVSPTSSAANSPTFSHCPSISSPPPNSPRPTSGFFSSLPTAPRSPSLPHASG
VSSPPPTSTKAPVDFSRGPGSPEPSPAAGEDVSGELPRLDAFCGKLRRSIRRVVLESVSM
DKFLPETPASSEPGDMSPCRSPSTPRHLRFRQSGVTPGDNSRCPLSPASAFAIATAAAGH
SSTQSFINSDKVCDKEFIIRRAATNRVLNVLRHWISKHSQDFEMNIGLKMGVINLLEEVL
RDPDLLPQERKATSNILSALSQEEQDDAQLKIEDILQMVSMNTY
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggcgtgcggtacaacgagggccacgctctgtttctgtctgtggttgcccgt
aaagagggctcaaagcgcggcttcctgagcaagaagaccacggagaacagccgctggacc
gagaagtacttcgccctctaccagaacgtgctcttctacttcgagaacgaccagagctcg
agaccctccgggatatacctgctggagggatgcacgtgcgagcgggcacctgcacccaaa
gtctccgccatcagcaaggagccggtggagaaacagcagcactacttcctggtggttttt
ggccacgatggacagaaacctctggagctgcggacggaggaagagtccgactgcaacgag
tgggtggagtctgtgcagcaggccagttactccgacatcatcatcgagcgtgagatcctg
atgcagaagtacatccacctggtgcagatcatggagacggagaagatcgcagccaatcag
ctccgcactcagctggaggaccaggacacggagatcgagaggctcaaagctgagattgtt
atgatgaacaaaaccaaggagaggatgctgccttaccacaacaaccaagaggaggaagac
ccagatattaaaaagatcaaaaaggttcagagcttcatgcgaggctggctgtgtcggagg
aagtggaagatcatcgtccaggactacatctcctcccctcacgctgagagcatgaggaag
aggaaccagatcgtcttcaacatggtggaggcagagacagagtacgtccaccagctctcc
atcctcgtcaactgtttcctgcggccgctccgcatggcggccagctccaagaaacctccc
atcaaccacgataacgtcagcaccatcttcctaaacagtgagaccatcatgtttctgcac
gagatcttccatcaaggtctgaatgctcggatcgccaactggcccactctagttcttgcg
gacctgtttgacatcttgctgccgatgctgaacatctaccaggagtttgtgcgtaaccac
cagtacagcctgcaggttctggctaactgtaagcagaacagagacttcgacaagctgctc
aaacagtacgagtccaacgctgcctgtgagggccgcatgctggagaccttcctcacctac
cccatgttccagattccacggtacatcatcactcttcatgagctgctggctcacacacct
catgagcatgtggagcgaaagagtctggagtttgccaaatccaagctggaggagctgtcg
aagatgatgcacgatgaggtgagcgacactgagaacatcaggaagaatctggccatagag
aggatgattgtagagggctgtgacatccttttagacaccagtcagacttttgtcagacaa
ggctctctcatccagctgccgtccagcagcgagcgggggatgctcagtaaagtccgcctg
ggctccctctctctgaggaaggaaggagagcgccagtgtttcctcttcaccaaacacttc
ctcatctgtacacgaacatctggaggaaagcttcacctgctgaagcaaggaggcacgttg
tctctgatagagtgcaccctaattgaagaactagaggccaatgacgaggactacaatgca
gcaggtcaaggcttcaaccacctggagtttaaggtcgtggtggagcctcctgacggtcag
gccttctctgtcgtcctcttggctccttcacgccaagaaaaggccgcctggaccagcgat
atcagccagtgcatcgataatatccgatgtaacggcctgatgaccagcgtctttgaggag
aactccaaagtatcggtgccgcacatgatcaaatccgatgcccgcctgcataaagacgac
atcgacatctgcttcagtaagaccctgaactcctgtaaggtccctcagatccggtatgcc
agcgtggagcggctgctggagcgactcactgacctgcgcttcctctccatcgacttcctg
aacaccttcctccacacctacaggatcttcaccacggcggccgtcgtcatcgacaagctg
gccgacatctacaggaagccgttcacctccatacccgtcaggatcgagcggctttcatgt
gaccgtctgtccatcatgtccctctgtcctgactacagtctgaagatcacacagctggcc
ctggaccagtccaagtctctggagctcttcttcgccaccaaccagggctcatgggggacg
gaccctctgaacaacaaatccccgaggctgatccgcaagttttcctctcctccgcccctc
accctctcctcccgcacctcctcccccgtccactgccgcaagctctccctcaattgcccc
atcagtggaaaaccaggagtcttggatgtgtcccccacctcttctgcagccaactccccc
accttcagtcactgcccctccatctcctcccctcctcccaactcacccaggcctacctct
ggctttttctcctctctgcccaccgccccgcgctctcccagcctcccccatgcctctgga
gtttcctccccgccccccacctccaccaaggcccccgtggacttcagccgcggtcccggg
tccccagagccgagcccagctgccggggaggacgtcagcggagagctgcctcgcttagac
gccttctgtgggaagctgaggcgcagcatccgcagggttgtcctggagtcagtttctatg
gacaagtttctccctgaaacaccggccagcagcgagccgggcgacatgtctccttgccgc
tcgccttcaacaccgagacacctccgcttcagacagtcaggagtcactcccggggataac
tcacgctgcccgttgtcgccagcttcagcgtttgcaatcgccacagctgctgcgggccat
agcagcacccagagttttattaattctgacaaagtctgtgacaaggaattcatcatccgg
agagctgcgaccaacagagttctcaacgtgctgcgacactggatttccaagcactctcag
gactttgaaatgaacattgggctgaagatgggggtgatcaatctgctggaggaggtgcta
cgagaccctgacctgctgcctcaggagagaaaagcaacatcaaacattttaagtgcactt
tctcaagaagaacaagatgatgctcagctaaagatagaggacatattacagatggtcagt
atgaacacctattag
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