Notothenia coriiceps (black rockcod): 104948208
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Entry
104948208 CDS
T04920
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104948208
04121 Ubiquitin system [BR:
ncc04121
]
104948208
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
104948208
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
104948208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
104948208
NCBI-ProteinID:
XP_010772682
UniProt:
A0A6I9N839
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MSDTEMSDEEVEDNDNNTDQNPGGDSGESEREVVLVPKKGPHSSSVWNFFGFDPDDDLQK
VVHCKHCSRMVATTSGNTTNLLNHLQRHHKIQYALAKKDNPKKKSNPQTTTQTSISQTLF
NGTPYSHSSRRHKEITKAITFYLAKDMASINTVQNEGFKNLMKTLDKRYSVPSRNYFSRT
ALPAMYYKILTTVETELKDVQHFATTTDLWSSRTMEPYMSLTVHFITSDFTMKSRCLKTA
FFPVDHTGDEIAVGLMESLHSWSLDPKRMVCITTDSGSNIIKASDINKWTRLQCFGHRLH
LAIAMVNRVLGQQEAITRVLARNTDRSKFANILTWQDIQVLEVIDKTLTPLAEFTDALSG
EQYVSVSSVKPVLHLFESLMAVKEDDPALARSIKTTILQYLQEKYSDPKTQALLDIATSL
DPRFKLDYVSEDNKTTVKTRLKDEMTSIVTMPASTQFNYCT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacagaaatgagtgacgaggaggtcgaggacaatgacaacaacaccgatcaa
aatcccggtggcgactctggcgagagtgagagggaagttgtgcttgtgccgaaaaaagga
ccacattcatccagtgtgtggaacttttttggatttgatcctgatgatgacttacaaaaa
gtcgtccactgtaagcattgttctcgcatggtcgcaacgacgtcaggtaacaccacaaac
ctattaaatcacctgcaacgtcaccataaaatacagtatgctttagcaaagaaggacaac
ccgaaaaaaaaatcaaacccccagacaacgacgcaaacatccataagccaaacgttattc
aacggaacaccatattcacacagctcacgaaggcacaaagagataacgaaagccatcact
ttttacttggctaaggatatggcatcaataaatacagttcaaaatgaagggttcaagaac
ttgatgaagacgctggataagcggtactcagtgccttcccgcaactacttttcacgtact
gcattgcctgccatgtactacaagattctaaccacagtcgagacagaactgaaagatgtc
cagcactttgcgacaacaactgacctgtggtccagtcgtaccatggaaccatatatgagc
ctgacggtgcatttcatcaccagtgatttcaccatgaaaagtcggtgcctaaagacagct
tttttccccgtggaccacacgggcgacgaaattgcagtgggactaatggaaagtctccac
tcctggagcttggatccgaaaaggatggtgtgcatcactacagatagtggatcaaacatc
ataaaagcatccgacataaacaaatggacaaggctccagtgttttggccacaggctacat
ctggctatagctatggtcaacagggtccttggacaacaagaggccattacacgagttctc
gcccggaacactgaccggagcaagttcgctaacattctgacatggcaagacatacaggtt
cttgaggtgattgacaagacactaacaccactggcagaattcacagatgcgctctcaggg
gagcaatatgtgtctgtctcctctgtgaagccagtcctccacctcttcgaatcactgatg
gcagtgaaggaagacgaccctgcactcgctcgctcgattaaaacaaccatcctgcagtac
cttcaggagaagtacagtgatccaaagacacaggcgctgctcgacatagctacaagtttg
gatccaaggttcaaactggactatgtcagcgaggacaacaaaaccactgtcaagaccaga
ctgaaggatgagatgactagcatcgttactatgccggctagcacccagttcaactactgc
acttaa
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