Notothenia coriiceps (black rockcod): 104948253
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Entry
104948253 CDS
T04920
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03020
RNA polymerase
ncc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104948253 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104948253 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncc03021
]
104948253 (polr3b)
Enzymes [BR:
ncc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104948253 (polr3b)
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
104948253 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
104948253
NCBI-ProteinID:
XP_010772734
UniProt:
A0A6I9N4B8
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
SEHFPLHSCLFQQCRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLT
GKTPLEVSKLNECPLDPGGYFIVKGQEKVILIQEQLSKNRIIVEQDRKGAVGASVTSSTH
EKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIFKGMGVESDQEIVQMIGTEEHVMASFGPS
LEECQKAQIFTQTQALRYLGNKVRRQRMWGGPKKTKMEEARELLASLILTHVPVKEFNFR
AKCIYLAVMVRRVILAQGGNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSELKKIAD
QIIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISAL
GMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDG
PIIKLAFNLGVEDVNLLCGEELSYPSVFLVFLNGNILGVIRDHQKLVSTFRLMRRAGFIN
EFVSISTNLTDRCVYISSDGGRLCRPYIIVKRGMPMVKNKHMEDLSQGYRTFEDFLHEGL
VEYLDVNEENDCQIALYEHMINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAM
GKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTRTIELIDFEKLPAGQNATIAVMSYSGY
DIEDALILNKASLDRGFGRCLVYKNAKCTLRRYTNQTFDKVMGPMLDAVTRKPIWRHNIL
DADGICSPGEKVENKQVLVNKSMPTVTQAPLEGSTQPGQPQYRDVPVSYKGSTDSYVEKV
MISSNAEDAFLIKILLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDTGICPDVIM
NPHGYPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYQGKDFV
TSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGE
MERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYA
CKLLFQELQSMNIIPRLKLARYNE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
tcagaacatttccctcttcattcctgtttgtttcaacagtgtcgcctcagagacatgacc
tactctgcgcccatcacagtggacatcgagtacacgcgtggcagtcagaggatcatccgc
aacgcactgcccatcggaaggatgccgatcatgctgcgaagctcaaactgtgttctcaca
ggaaagacacccttggaggtttctaaactcaatgaatgtcctctggatccagggggttac
ttcatagtaaagggtcaagagaaagtcattctgatacaagagcagctgtccaagaatcga
atcattgttgagcaggacaggaagggagcagtcggagcctcagtgaccagctccactcat
gagaagaaaagcagaactaatatgattgtcaagcaaggcagattctacctgaaacacaac
acgctgtcagaggacgcaccgatcgccatcatattcaagggcatgggcgtggagagtgac
caggaaatcgtgcagatgatcgggacggaggagcacgtcatggcgagcttcggcccgagc
ctggaggagtgtcagaaggcccagatcttcactcagacgcaggctctgcggtatctgggg
aataaagtgcggaggcagcgcatgtggggaggaccgaagaagaccaagatggaggaggcc
cgagagctcctggcgtctctaatcctcacacatgtgcctgtcaaagagtttaacttccgg
gctaagtgtatctacctggctgtgatggtgcggagggtgatcctggctcaagggggcaac
aaggtggacgacagagattactatggcaataaacgtctcgagttggctggacagctgctg
tccctgctgtttgaggatctgtttaagaagttcaactctgaactgaagaaaatcgccgac
cagatcatccccaagcagagagcagctcagttcgacgtggtgaagcacatgcggcaggac
cagatcacaaacggcatggtcaatgccatatccacgggcaactggtctctgaagagattc
aagatggaccgtcagggtgtcacccaggtcctgtcccgtctctcctttatttcggctctt
ggcatgatgaccaggatctcctcccagtttgagaagaccaggaaggtcagcgggccgcgc
tccctgcagccgtctcagtggggcatgctgtgtccgtctgacactcctgagggagaggcc
tgtggtctggtgaagaacttggctctgatgacccacatcaccacggacatggaggacggt
ccgatcatcaaactggccttcaatctgggcgtagaagacgtcaacctgctgtgtggagag
gagctctcctaccccagcgtcttcctggtcttcctcaacggtaacattctcggagtgatt
cgggatcatcagaagctggtcagcaccttcagactgatgcgccgggcgggtttcatcaac
gagtttgtatcaatctccactaacctgaccgaccgctgcgtctacatctcctctgacgga
ggacgtctctgcaggccttacatcatagtaaagaggggtatgccaatggtgaaaaacaaa
cacatggaagatctgtcacagggctacagaacctttgaagacttcctgcacgagggcctt
gtggagtacctggatgtaaatgaggagaatgactgtcagatcgccctttatgaacacatg
attaacaaagacacaacacacttggagatcgagcccttcacgctgctcggggtgtgtgct
ggcctcattccctacccccaccacaaccagtctcccaggaacacataccagtgcgctatg
ggcaagcaggccatgggtactattggctacaaccagaggaaccgtattgacaccctgatg
tacctgctggcgtaccctcagaagcccatggtcaaaacaagaaccatcgagctgattgac
tttgagaagctgccggccggtcagaacgccaccattgctgtgatgagctacagtggctac
gacattgaggacgctctgatcctcaacaaagcctcccttgatagaggatttggccgttgc
ctggtctataaaaacgccaaatgcacgctgcgacgttacaccaaccagaccttcgacaag
gtgatggggcccatgctggatgccgtcacacgaaagcccatctggaggcacaacatcctg
gatgctgacggcatctgctctcctggtgagaaagtggagaacaagcaggtgttggtgaac
aagtccatgccaaccgtcacccaggcgccactggagggcagtacccagccaggccagccg
cagtacagagacgtgccggtcagctataagggctccacagactcgtacgtcgagaaggtc
atgatctcatccaacgctgaagatgctttcctcatcaagatcctcctcaggcagaccagg
aggccagagataggagacaaattcagcagtcgacatggacagaaaggtgtttgtggcctc
atcgtccctcaggaggacatgccgttctgtgacacgggcatctgtccagacgtcatcatg
aaccctcacggatatccctccagaatgacggtggggaagttgatcgagctgctggccggg
aaggcgggggtcctggacggacgcttccactacggcacggcgtttggaggcagcaaggtg
aaggacgtgtgtgaggatctcgtccgccacgggtacaactaccagggcaaagactttgtc
acctcaggaatcactggggaacctctggaagcgtacatctacttcggaccggtgtactat
cagaaactaaagcacatggtgctcgacaaaatgcacgccagagcccgaggccccagagcc
gtcctcaccaggcagcctacagagggtcgctccagagacggagggctgcgtctgggcgag
atggagcgtgactgtctgatcggctacggagcgagcatgctgctgctggagcgcctcatg
atctccagtgacgccttcgaggtggacgtgtgcgggcagtgcggcctgctgggatactca
gggtggtgtcactattgtaagtcctcctgccacgtctcctctctgcggatcccgtacgcc
tgcaagctgctgttccaggagctgcagtccatgaacatcatcccccgactcaaactggca
cgctacaacgagtga
DBGET
integrated database retrieval system
