Notothenia coriiceps (black rockcod): 104948266
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Entry
104948266 CDS
T04920
Symbol
dync1i2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04145
Phagosome
ncc04814
Motor proteins
ncc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104948266 (dync1i2)
09142 Cell motility
04814 Motor proteins
104948266 (dync1i2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104948266 (dync1i2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104948266 (dync1i2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104948266 (dync1i2)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
104948266 (dync1i2)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
104948266 (dync1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_SPT8
Nbas_N
Beta-prop_DCAF4
CDRT4
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
104948266
NCBI-ProteinID:
XP_010772747
UniProt:
A0A6I9N8A7
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKQAADQLKDAANHQDDTDLEKKRRETE
AMLQSMGITQDTPAVPPPISPTPKSAGTPSEAGSQDSDGAVGPRTLHWDSDPSTLQLHSD
SELGRGTPKLGMAKVTQVDFPPRETVSYTKETQTPVVTQQKEAEEEEEEEESAPIEAAVE
TQTEKPDQKEEEEAAPHELTEEEKLQILHSEDFANFFDQSTRIIERALSEHVDLFFDYSG
RDLEEKEGEIQAGTKLSLNRKFMDERWSKHRVVTCLDWSLQYPELLLASYNNNEEAPHEP
DGVALVWNMKYKKATPEYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLWDNRSNKRTP
VQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDSMELVFKQS
KAVAVTSMSFPLGDVNNFAVGSEDGSVYMSCRHGSKAGISEMFEGHQGPITGIDCHTAAG
PLDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHL
DLWNLNNDTEVPTASVTVEGNPALNRVRWAHSGKEIAVGDSDGRVLVYDVGEQTAVPRND
EWTRFVRTLAEINENRDDAEELAAQHLVA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaagcagagcttgaaaggaagaagcaacgcctggctcaa
atcagagaggagaagaaaaggaaggaggaggagcgcaagaagcaagcggcggaccaattg
aaagatgctgcaaatcaccaggatgatacagacctggagaaaaaaagacgtgagacggag
gctatgctacagagtatgggcataacccaagatactcctgctgtccctcctcccatctcg
ccaactcccaaatcggcgggcacaccgagtgaggcagggagccaagactctgatggagcc
gtgggacccaggactctgcactgggactctgacccgtccactcttcaacttcactctgat
tctgagctggggcgaggaactccaaaactgggaatggccaaagtcacacaagtggacttc
cctccacgtgagactgtgtcctacactaaagagacccagacacctgtcgtgactcagcaa
aaagaagctgaggaagaagaagaagaggaggaaagtgctccaatcgaagcagcagtggag
actcagactgagaaaccggaccagaaagaggaggaggaagcagccccccacgagctgaca
gaggaggaaaaactccagatcctgcactccgaagattttgcgaatttctttgaccagagc
actcgcattattgagcgagctctgtcggagcatgtggacctcttcttcgactacagcggt
cgtgacctggaggagaaggagggtgaaatccaggccggtacaaagctgtccctcaacagg
aagttcatggatgagcgctggtccaaacatcgcgtcgtcacctgcctggactggtccctg
cagtatcctgaactgctgcttgcctcatacaacaacaacgaggaggctcctcacgagcca
gacggcgttgccttagtgtggaacatgaagtacaagaaggccacaccggagtacgtcttc
cactgtcagtctgctgtaatgtcggctgcttttgccaagttccaccccaacgttgtggtg
gggggtacgtactcgggacagatcgtactgtgggacaaccggagcaacaagaggaccccg
gtgcagaggacccccctgtcagcagcggctcacacgcaccctgtgtactgtgtgaatgtg
gtcggcacccagaacgcccacaacctgatcagcatctccaccgacggcaagatctgctcc
tggagtctggacatgctctctcagccacaggacagcatggagctggtgttcaagcagtcc
aaagctgtagctgtcacctccatgtctttccctctcggagatgtcaacaattttgcggtg
ggcagcgaggacggctccgtctacatgtcgtgtcgtcatggaagcaaagcgggcatcagc
gagatgtttgagggccaccaggggcccatcacagggatcgactgccacacagctgcaggg
cctctggacttctcccacctgtttgtcacctcctccttcgactggactgtcaagctgtgg
agcaccaagaacaacaagccgctgtactcatttgaagataactcggattacgtatatgac
gtcatgtggtctccgactcaccctgctctgtttgcttgtgtggacggagtgggtcatctg
gacctgtggaacctcaacaacgacacggaggttcctaccgccagcgtcacagtggagggt
aacccagctctgaacagagtgaggtgggctcactctggcaaagaaatcgccgtgggagac
tctgatggacgagttcttgtgtatgatgtcggagagcaaactgcggttccacgaaacgac
gagtggacccgctttgtccgcacgctggcagagatcaacgagaacagagacgatgcggag
gagctggcggctcagcatctggtcgcctga
DBGET
integrated database retrieval system
