KEGG   Notothenia coriiceps (black rockcod): 104948347
Entry
104948347         CDS       T04920                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04145  Phagosome
ncc04210  Apoptosis
ncc04530  Tight junction
ncc04540  Gap junction
ncc04814  Motor proteins
ncc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104948347
  09143 Cell growth and death
   04210 Apoptosis
    104948347
  09144 Cellular community - eukaryotes
   04530 Tight junction
    104948347
   04540 Gap junction
    104948347
  09142 Cell motility
   04814 Motor proteins
    104948347
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104948347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncc03019]
    104948347
   03036 Chromosome and associated proteins [BR:ncc03036]
    104948347
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ncc04812]
    104948347
   04147 Exosome [BR:ncc04147]
    104948347
Messenger RNA biogenesis [BR:ncc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104948347
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     104948347
Cytoskeleton proteins [BR:ncc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    104948347
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104948347
  Exosomal proteins of other body fluids (saliva and urine)
   104948347
  Exosomal proteins of colorectal cancer cells
   104948347
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 104948347
NCBI-ProteinID: XP_010772844
UniProt: A0A6I9N4N1
LinkDB
Position
Unknown
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGIYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDTVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNSCFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGDGEEEGEEF
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctctatccacgtcggtcaggctggagtccagattggcaatgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaag
acgtgtggaggaggagacgactccttcaacaccttcttcagtgagactggagctggaaag
cacgtccccagagcagtttttgtggacctggagcccactgtcatcgatgaggttcgatcc
gggatctaccgccagctgttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgaggacactacaccatcggcaaggagatcattgacacagtgctggac
aggatccgcaaactggctgaccagtgcaccggtcttcagggtttcctggtgttccacagc
ttcggagggggcaccggctctggtttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtccaaactggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctcaccacccacaccaccctggagcactctgactgt
gccttcatggttgataacgaggccatttatgatatctgccgtaggaacctcgatatcgag
cgtccctcttacacaaacctgaacaggttgatcagtcagattgtgtcctccatcactgcc
tcccttcgctttgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttccctctggccacctatgcccctgttatctctgcagagaaa
gcgtaccatgagcagttaaccgtgtcagaaatcactaattcctgtttcgagccagccaat
cagttggtgaaatgtgacccacgtcacggtaaatacatggcctgctgccttttgtatcgt
ggtgatgtcgttcccaaagatgtgaacgctgccattgccaccatcaaaaccaagcgctcc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagccgccc
actgtagttcctggtggagacctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgatctgatgtacgct
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggccgctctggagaaagattacgaggaggttggagtcgactccatt
gagggtgatggagaggaagagggagaagaattttaa

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