Notothenia coriiceps (black rockcod): 104948382
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Entry
104948382 CDS
T04920
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104948382 (hps3)
Membrane trafficking [BR:
ncc04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
104948382 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
104948382
NCBI-ProteinID:
XP_010772877
UniProt:
A0A6I9NC24
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MVHVYNCHPFASQQIVQVEQEPGLVCCGGGALFVVATGGCKVEAYNVEQEGCPFICRFAT
MGTVKSIQHSKMGDYLVTIEEKNSATYLRAYTNWRYQAEGKARVGVRLLGHLLRGASMRG
GVQMEIIEIPLSKRPVAVACCPVTGDLLVGCEDTLVLFALRRQNQQSLNQSQQILQSTSQ
NSSQNQAQSPSPNQNFLDFERSVILHLPKIEPKQVALCGGYVAVQMELEVLVLKLDASSD
PKTQEESSDTKKDHIDDQADFMVLPRHQELLGDVAKDCDIPVSIENTGLEDGKGQYTLSY
VLFRRFTPDFFQGCSVEETQLHSLQLYPLYTSNQSVPLEEPACVFCFFSLPNAGYLYSLK
GGVELLSTYQYPEKVLKAVLTDHLLHVITKSALQCFTVRCAAVAARIVDPYIDTTMKACP
PCSMEVCALRIQLFIGLRSVCVYGRHVILLSAADTETPEEPERTPQRRRLKLKEHTLLTG
IFLAVGIDPATTPALESFLSRPFLSRKWTISSPKETSPAGHGWNLYVVDSVSPLTLYQEM
VEYSERYAETNPQAQSLRHLLSEAHLFLRASLLRTEPSEQPRNIEGEAAVTLQTDTDAPA
DRQTAAQTDRQEVEEALRHNCAQLGDCFSRGSQKDCHLALPYYRMSGLSVTEVMARNRPL
PSSPHTYGPGFLFYLKHFLFEETEQTLSQEAADEVIDILSKSEPSQLVSVCASPSMINLS
PAKTLQILIHQEDTCGVSVLLTITMATMMLCLDDLPQYTQLMERHAEMLLVYRFIEEPRL
LLHGGVGGQHTHIRPTRLTRQLAKSQPGLLVAAMVALHENSKVQLEQADHIFKELGCENC
LQVDFWEAMLMASSQEAVIQELLFRLVSIYIDRLTNTTSDTHLNEPHTPSRRRPLKSADD
LINSCSHYGALYPWLTVLNPAHTTSSQHQEALYKLQSLLCGPSLSVGSVVPLMERLSEET
LWGFSLHLLCSTRRGQYDRSIEKLLDRCPQAIIAYANHQLQDIHMMLWWQKLLPELCNRT
RAASDNSILLAALKETLVVVAMEMSPTDFLELIPDDGTASYFLPYLLSCSQRHLMA
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtctacaactgccatcctttcgcctcacagcagatagtacaggtggagcag
gagcctggactggtctgctgtggagggggagctctgtttgtggtggcgactggaggatgc
aaggtggaggcttacaatgtggagcaggagggctgccctttcatctgtcgctttgccacc
atgggcactgtgaagagcatccagcacagcaagatgggagattacctggttaccattgag
gagaagaacagtgccacttacctgagagcctacaccaactggcgttatcaggcggagggg
aaggcccgggtcggggtgcgtttgttgggccacctgctgcgaggtgcgtctatgcggggc
ggggtgcagatggagatcatcgagatccctctttcaaagcgccctgttgccgtggcatgt
tgtccggtgacaggagaccttctggtcggctgtgaggacacgctggtcttgttcgccttg
aggagacagaaccagcagagcctgaatcagagtcagcagatccttcagagcacctcgcag
aactccagtcagaatcaagctcagtctccaagtccaaaccagaatttcctggattttgaa
cgctcagttatcctgcatctcccaaagatcgagcccaaacaggtggcactgtgtggaggt
tatgtggcagtgcagatggagctggaggtgctggttttgaaactggatgcatcttctgat
cctaaaacccaggaggaatcatcagacacaaagaaagatcatatagatgaccaggctgac
ttcatggtccttccgagacaccaggagttgctgggtgatgtagctaaagactgtgacatt
cctgtcagcattgagaataccgggctggaggacggaaaaggacaatacacgctatcatat
gttctcttcaggcgtttcactccagacttcttccagggctgcagtgtggaggaaactcaa
ctccactcactgcagctttacccactgtacaccagtaaccaatccgtgcctctggaagaa
ccagcatgtgtcttctgcttcttctctctcccaaacgctggctacctgtacagtctgaag
ggtggtgtcgagcttctctccacctatcagtatccagagaaagtcctgaaggcggtgcta
acggaccacctgctgcacgtcattacaaagagtgcattgcagtgtttcacagtgcgctgt
gcagcagtagcagccaggattgtggacccttacatcgacaccaccatgaaggcctgtccg
ccctgcagcatggaggtgtgtgcgctcaggattcagctgtttatcggtctgcgatcagtg
tgtgtctacggccgccatgtcatcctgctctctgccgctgacacagagacaccagaggaa
cctgaacgcaccccgcaacgcagacgcctcaagttgaaagaacacaccttgctgactggt
attttcttggcggtgggaatcgatcccgcaaccacaccggctctggagagctttctatca
cggcccttcctgagcaggaaatggacgatctcctctcccaaagaaaccagcccagcagga
cacgggtggaacctctatgtggtcgacagcgtcagccccctcactctttaccaagagatg
gtcgaatacagcgagcggtacgcagagaccaacccgcaggcccaaagccttcggcacctc
ctgagtgaagctcacctcttcctccgtgcctccttactcaggacagagccttcagagcag
ccacgaaacatcgagggtgaagccgccgtgactctgcagacagatacagacgcaccagct
gatagacagacagctgcacagacagacaggcaggaggtggaggaggcactcaggcacaac
tgtgcacagctgggagactgtttcagcaggggcagtcagaaggactgccacctggccttg
ccgtactacaggatgtccggtctgtcagtcacagaagtcatggccagaaaccgcccactt
cccagcagccctcacacctacggccctggcttcctgttttacctgaagcatttcctgttt
gaagaaacagagcagactctcagccaggaggcagctgatgaggtcatagacattttaagc
aaatcagagccctcacagctcgtcagtgtgtgtgccagcccgtccatgataaacctcagt
cccgccaagacgctgcaaatcctaatacatcaggaggacacgtgtggtgtgtctgttctt
ctcacaatcaccatggcaaccatgatgctgtgtttggacgacctgccacagtacacacag
ctgatggagagacacgccgagatgctgctggtgtacaggttcatcgaggagcccaggctg
ctgctgcatggcggagttggaggccagcacacacacatccgtcccacacgactgacccga
cagctggcaaagtcccaaccaggactgctggtggctgccatggtggctttacatgaaaac
agcaaagttcagctggaacaggctgatcacatattcaaggagctgggctgtgagaactgc
ttgcaggtggatttctgggaggcgatgctcatggcctcctcacaagaagctgtcatccag
gagctcctgttccgacttgtgtccatctatattgaccgactcacaaacacaacttccgat
acacacctcaacgaaccacacacaccttcaagacgaaggccgttgaagagcgctgacgat
ctgataaactcgtgctctcattacggtgctctctacccgtggctcactgttctcaatcca
gctcacactaccagctcccaacaccaggaggcgctgtacaaactacagtctctactgtgt
ggtccgtctctatctgtgggctccgtcgtgcctctgatggagcgtctgtcagaggaaact
ttgtggggcttcagcctgcacctcctctgctccaccaggagggggcagtatgaccgtagc
attgagaagctgctggaccgatgtcctcaagccatcatagcctatgccaaccaccagtta
caggacatacatatgatgttgtggtggcagaagctgctccctgagctttgtaacaggacg
agagctgcttcggacaacagcatcctattggcagccctcaaagagacgctggttgtggtt
gccatggaaatgagtccaacagactttctggagctgatacctgacgacgggacggcctcc
tacttcctgccttacctgttgagctgtagccagagacatttaatggcctga
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