Notothenia coriiceps (black rockcod): 104948726
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Entry
104948726 CDS
T04920
Symbol
nhlrc1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104948726 (nhlrc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104948726 (nhlrc1)
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104948726 (nhlrc1)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104948726 (nhlrc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
NBCH_WD40
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
104948726
NCBI-ProteinID:
XP_010773248
UniProt:
A0A6I9ND56
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MAEGPAFPSRGSLRSPEEILREIQINLLECKVCFEKFSTQQREHRPQNLSCGHVLCLECI
RALSHPLLRKLECPFCRQLCSVDSNSHCQALSDLQELLLSLSPTPPAPPHRAKEGLGLAE
GLTARALHHCTAFGGWGTLINPTGISVLGSSGTIVVVHDGEKRVVVFSPQGRKLHSFGPK
GQGSGEICFPVDVAVTSYGHVVVTDAGDKALKVFTSRGNHVLTVKDSFQMPWGVDTDSCG
HILVSDIQAGTLSQVKVDFINGLAVKNQRVVSDLQHPKAVACCGATGNTAVMEHLSEDTY
PPGRNPHTRLRVFTKDFRLLYQTDTFSLMLQSKVRLQMSVMTFDQNGDVIVIDSNMGMIW
SLGQLQSGPALTPLVGDDLIRPVGLVTLNNSLIILDGGDHTVKIYSAKSDNGPLI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggtcctgctttcccgagtcgaggctccctgaggagtcctgaggagattctc
agagagatccagatcaacctgctggagtgtaaagtctgcttcgagaagttcagcactcag
cagagggagcacagaccgcagaacctctcctgcggccatgtgctctgtctggaatgcatc
agggctctgtcccaccctctcctgaggaagctggagtgcccgttttgtcgacagctgtgc
agtgttgacagcaactcccactgccaggctcttagtgacctgcaggagctgctgttgtcc
ctgagtcccacaccccctgcccctcctcacagggcaaaggaaggccttggcttggctgaa
ggtctgacagccagggctctgcaccactgcacagcctttggggggtgggggactcttatc
aaccccactgggatatccgttttgggatcttcaggtactatagtggtggtgcatgatggc
gagaagagggtggtggtgttcagtccgcagggcaggaagctgcacagttttgggccaaaa
ggacaaggcagtggggagatctgtttcccagtggatgtggctgtgacttcctatggtcac
gtggtggtgacagatgctggggataaagccctgaaggttttcacctccaggggaaaccat
gtgttgacggtgaaagattcctttcagatgccctggggtgtagatacagacagctgtggg
cacatcctggtctcagacatccaggccggtacgctgtctcaggtaaaggtggactttata
aacggtctcgctgtaaagaatcaaagagtcgtatcagacctgcagcatccaaaagcggtg
gcctgctgtggagcgactggaaacactgcagtgatggagcatttatctgaggacacatat
ccaccagggaggaacccacacaccaggctgagagtgttcacaaaagacttccgcctcctt
tatcagacggacactttcagcttgatgctgcagtcaaaagtgaggctgcaaatgtcagtc
atgacctttgaccaaaatggagatgtgattgttattgattccaatatggggatgatttgg
agtttggggcagctccagagtggccccgccctgaccccattagttggtgatgaccttatc
cgcccagttggactggtgacactgaacaactccctcatcattctggatggtggagaccat
acagtgaagatttattctgcaaaatctgataatgggcccttgatatag
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