Notothenia coriiceps (black rockcod): 104948866
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Entry
104948866 CDS
T04920
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03420
Nucleotide excision repair
ncc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104948866
09124 Replication and repair
03420 Nucleotide excision repair
104948866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ncc03051
]
104948866
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104948866
Proteasome [BR:
ncc03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104948866
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104948866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
Ubiquitin_2
Dsc3_N
CUE
UBA_2
Motif
Other DBs
NCBI-GeneID:
104948866
NCBI-ProteinID:
XP_010773397
UniProt:
A0A6I9NA16
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MLIITLKTLQQQTFKIEIDPELTVKALKEKIEKDRGKDAFPAAGQKLIYAGKILNDDTLL
EEYKIDEKNFVVVMITKPKPAPPPKAAPQPTPQPAAAPAPSSASTSVPPTPTHSVSAATP
APQSAPPSESKPPVPETPPLAPVEAPDSSTAPAPTPDSTPAPPPAPEASAPADQPPPSAK
PEEKPREDPGDEPSATAPVSSSLVDELDLLEEAASILVTGPAYENLVSEIMCMGYEREQV
VAALRASYNNPDRAVEYLLMGIPADATDLPPQEPVRQSAPTNPPAPAAQEPQPPPPASTT
GPVSGSQPPSAGGGTPPTGNPLEFLRNQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLL
QQITQHQERFVQMLNEPRPGDTEGEGEGAEGQGPPQPNYIQVTPQEKEAIERLKALGFPE
GLVIQAYFACEKNENLAANFLLQQTWDDE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgctgataataacactgaagaccctccaacagcagacgttcaaaatagaaatagaccca
gaactgacggtgaaagccctgaaggagaaaatagagaaggaccgaggaaaagatgcgttt
cctgctgcaggtcaaaaactcatctatgccggcaaaatccttaatgatgacaccctgctg
gaagaatacaaaattgatgagaagaactttgtagtggtcatgataacgaagcctaaacca
gcccccccaccaaaggcagcccctcaaccaactccccagccagctgcagctccagcacca
tcctccgcctcaacatcggtgccccccacacccacacactcagtgtctgcagccacacct
gccccacagtctgcgccgccctctgaatcaaagcccccagtcccagaaacccctcccctg
gctcccgttgaagctccagactccagtacagccccagcccctacaccagactctactcca
gcccctcctccagctccagaggcctcggcccctgcagatcaaccccccccttctgccaag
ccagaagaaaagccaagagaagaccctggggatgaaccgtccgccactgcaccagtctct
tccagccttgtagatgaactggatctccttgaagaagcagcctcaatacttgtgacaggt
ccagcctatgagaacctggtgtcagagatcatgtgtatgggctatgagcgggagcaggtg
gtggctgctctaagagccagctacaacaaccccgaccgggccgtggagtatctcctcatg
ggtatcccagccgatgccactgatctgccccctcaggagccagtgagacagagtgctccc
accaacccccccgccccggctgcacaagaaccacaaccacccccaccagcctcaaccaca
gggccagtgtctggcagccagcccccctctgctggggggggaaccccccccacagggaac
cccctggagttcctgaggaaccagcctcagttccagcagatgagacagatcatccagcaa
aacccggccctgcttccagctttgctgcagcagctgggccgagacaacccgcagctgctg
cagcaaatcacgcagcaccaggagcgttttgtgcagatgttgaatgaaccaagacctgga
gacacggaaggggagggggagggggccgagggccaggggccgccacagcccaactacatc
caggtcaccccccaggagaaggaggccatcgagaggttaaaagcgctgggctttcctgaa
ggcttagtcatccaggcttacttcgcctgtgagaagaacgagaatctagctgctaacttc
ctgctacagcagacatgggatgacgagtag
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