Notothenia coriiceps (black rockcod): 104948922
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Entry
104948922 CDS
T04920
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03030
DNA replication
ncc03410
Base excision repair
ncc03420
Nucleotide excision repair
ncc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104948922 (rfc4)
03410 Base excision repair
104948922 (rfc4)
03420 Nucleotide excision repair
104948922 (rfc4)
03430 Mismatch repair
104948922 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncc03032
]
104948922 (rfc4)
03036 Chromosome and associated proteins [BR:
ncc03036
]
104948922 (rfc4)
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104948922 (rfc4)
DNA replication proteins [BR:
ncc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104948922 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
104948922 (rfc4)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104948922 (rfc4)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104948922 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
104948922 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
RCF1-5-like_lid
AAA_lid_RFC1
DNA_pol3_delta2
AAA
AAA_assoc_2
KH_DUF2096_C
Gp44_lid
Cdc6_lid
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
104948922
NCBI-ProteinID:
XP_010773463
UniProt:
A0A6I9NDX8
LinkDB
All DBs
Position
Unknown
AA seq
226 aa
AA seq
DB search
GKPCPPFKIIILDEADSMTGPAQAALRRTMEKESRTTRFCLICNYISRIIEPLTSRCSKF
RFKPLSNQIQEERLLDICEKESLKYSKESIAALVTVSEGDLRKAITFLQSAARLNMDREI
TESAIIEIAGVVPPKMIDGLLQICLSGTFEKLEVAVRNMVDEGYAATQILGQLHEAVIEH
DLSDKQKSVITDKMAVVSKCLSDGADEYLQMLSLCSVIMQQASQHN
NT seq
682 nt
NT seq
+upstream
nt +downstream
nt
tgggaagccgtgtcctcctttcaagatcatcatcctggacgaggcggactccatgacggg
gccggcccaggcggctctgaggcgcaccatggagaaggagtcccgcaccacccgcttctg
cctcatctgcaactacatcagcaggatcatcgagccccttacctccagatgttccaagtt
tcgcttcaaacctctgtccaatcagatccaagaagagcggctgctggatatctgtgagaa
ggagagccttaaatacagcaaagagagtatagcagcgttagtgacggtgtctgaggggga
tctgcggaaagccatcaccttcctgcagagtgcggcacgcctcaacatggacagggagat
cacagagagcgccatcattgaaatagctggggtcgtccctcccaagatgattgacggctt
gctccagatatgcctctcaggaacttttgagaaactagaggtcgcagtcaggaacatggt
ggatgaaggctacgcagccacacagatcctgggtcagctccatgaggctgtcatagagca
cgacctgagtgacaagcagaagtcagtcataacagacaagatggcggttgtgagtaagtg
cctgtcggacggtgcggatgagtacctgcagatgttgagtctctgttcagtcatcatgca
gcaggcctcccagcacaactga
DBGET
integrated database retrieval system