Notothenia coriiceps (black rockcod): 104948961
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Entry
104948961 CDS
T04920
Name
(RefSeq) vesicle-trafficking protein SEC22b-B isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04130
SNARE interactions in vesicular transport
ncc04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104948961
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104948961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104948961
Membrane trafficking [BR:
ncc04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
104948961
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
IMD
Motif
Other DBs
NCBI-GeneID:
104948961
NCBI-ProteinID:
XP_010773510
UniProt:
A0A6I9NGC0
LinkDB
All DBs
Position
Unknown
AA seq
219 aa
AA seq
DB search
MVLLTMIARLADGLPLAASMQEDEQGSEKLGRDLQQYQSQAKQLFRKLNEQSPSRCTLEA
GSMAFHYVIEKGVVYLVLCEASFAKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFD
TYIQKTKKSYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSL
SKKYRSDAKYLNTRSTYAKLAAGGVFFIMLIVYVRFWWL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgacgatgatcgctcggctggcggacgggctgccgttagccgcctccatg
caggaggacgagcagggaagtgaaaagttgggtcgggaccttcagcagtatcagagtcaa
gctaagcagctcttcaggaaactcaatgaacagagtccatcacgctgcactttagaggcc
ggctccatggcatttcactatgttatagagaaaggcgtggtgtacctggtgctgtgtgaa
gccagctttgctaagaagctggcctttgcttaccttgaagacctgcaggcagagtttcat
gagcagcatgggaagaaggtccctacagtttcacggccatactccttcattgaatttgac
acctacatccaaaaaaccaagaagtcgtacatcgacagccgagcgaggaggaacctgggc
agcatcaacacagagctgcaggacgtccagaggatcatggtggctaacatagaggaggtg
ctgcagagaggagaggctctgtcggcgctggactccaaagccagcaacttgtccagcctg
tccaagaagtacaggagcgacgccaagtatctgaacacccgctccacctatgccaagctg
gcagccggcggcgtctttttcatcatgctcattgtctacgtacgcttctggtggctctga
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