Notothenia coriiceps (black rockcod): 104948990
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Entry
104948990 CDS
T04920
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04136
Autophagy - other
ncc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104948990 (atg13)
04136 Autophagy - other
104948990 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104948990 (atg13)
03029 Mitochondrial biogenesis [BR:
ncc03029
]
104948990 (atg13)
Membrane trafficking [BR:
ncc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104948990 (atg13)
Atg1 complex
104948990 (atg13)
Mitochondrial biogenesis [BR:
ncc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104948990 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
104948990
NCBI-ProteinID:
XP_010773559
UniProt:
A0A6I9N6K4
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MESGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSNRQFERSAPIVGIIVDHFVDPPGIGHRNANMGHPCNYRALDDE
DGGYVGVQDSQEVCTTSFSTSPPSQCVCTLSPSPCKLYKPLPLDSLPLPLAPGLVTHTLY
ASRFSYHPPAGAAELCPPAASQALHAGKEHGGVVLAPAQPLHGADAHLTVEQAANTPGGS
GDDDGLTHSGERRRDEGRRSVSPSDPVESLNAFTRKIGAFVNKPNTQLTAASLDLPFAAF
APRGLDLEENDPMVQPPDSPPCPSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSKDDLLP
MDLGTFYREFQNPPQLASLSLHISAQSMADDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggcctgagtccccaggataaaaaagacttggacaagttcattaagttcttt
gccttaaagactgtccaggtgattgtccaagcgcggcttggagagaagatatgcactcgc
tcgtcctcatcgcctactggctctgattggtttaatttggccatcaaagacatcccagag
gtgactcatgaagctaaaaaggcgctggctggacaactcccaggcatcgggcgctccatg
tgcgtcgagatctccctgaagacgtcagagggggactcaatggagttggagacatggtgt
ctggagatgaatgagaagtgtgataaggacatcaaggtgtcgtacacagtctacaaccgt
ctgtctgtccttctgaagtctctgctggccatcaccagagtaacacccgcctacaaactg
tccagaaagcagggacacgactatgtgatattatacaggatttacttcggggaagtccag
ctgagtggattaggagaagggtttcagacggtgcgtgtcggtgttgttggcacacctgtt
ggcacggttacactgtcatgcgcttaccgcaccaacctggcattcatgtccaacagacag
tttgagaggtctgctcccatcgtggggatcatcgtggatcactttgtggatccacctggc
atcggccaccgtaatgcaaacatgggacatccctgcaactacagagctctagacgatgag
gacggaggatatgtaggagttcaggattcccaggaggtctgcaccacctccttctccacc
tcccctccctcacagtgtgtgtgtacactgagtccctcgccctgtaaactgtataagccc
ctccccctggacagtctgccgcttccattggctcctggacttgtcactcacactctgtat
gcttccaggttttcatatcaccctccagctggagctgctgagctgtgtccccctgctgca
agccaggcgttgcatgctgggaaggagcacggaggagtggtattggctcctgctcaacct
cttcatggagctgatgctcatctcacggtagaacaagctgccaacactcctggtggcagt
ggtgatgacgatggcctgacgcacagtggagaaagaaggagggatgaagggcggaggagc
gtctctccctctgaccccgtggagtcgctcaacgccttcaccaggaaaattggagccttt
gtcaataaacccaacacacagttaacagcagccagtctggacctgccctttgctgcattt
gctcctcggggcctggacttagaggagaatgatcccatggtgcagcctccggactcgccc
ccctgcccctcccctctgcaggccagcctccactctcagggctcggagggatcggggcag
caggacgacttcgtcatggtcgactttcgtccagccttctctaaagacgacctgctgccg
atggatctgggcactttctacagagagtttcaaaaccctccgcaactggccagcctctct
cttcacatcagcgcccagtcgatggccgatgacctggactcactgccagagaaacttgcc
gtctacgagaaaaacatcgacgaatttgacgcttttgtggacatgctccaataa
DBGET
integrated database retrieval system
