Notothenia coriiceps (black rockcod): 104949122
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Entry
104949122 CDS
T04920
Name
(RefSeq) sodium channel subunit beta-1-like
KO
K04845
voltage-gated sodium channel type I beta
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04261
Adrenergic signaling in cardiomyocytes
ncc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
104949122
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
104949122
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104949122
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104949122
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
TMEM132_C
HROB
DUF6755
Phage_zn_bind_6
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
104949122
NCBI-ProteinID:
XP_010773704
UniProt:
A0A6I9NGX1
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
MICHLSLLVFFNLFVSQCHGGCAEVDSMTEAVAGEGFLLGCISCKKREEVSARATVDWHF
KPLGVEDFKPIFHYEHPNANIMDEDFSNRLEWHGTKNNDIQIGAIYIHNVTFNETGTFRC
TIHRTLFLRQYNENVTVEKEVELTVVAVANRELTSVIAEIMMYVLIVVLQLWLIGVLIYC
YKKISEEYEARETHKALKAQAVLAKDNCDGVQLE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgatatgccacttgtctcttttggttttcttcaatcttttcgtgtctcagtgccatggc
ggctgtgcggaggtggactccatgactgaagccgtggcaggagaaggattcctgctgggc
tgcatctcctgtaagaagagagaggaggtgtccgcccgagccacggtggactggcacttc
aaaccgctgggagtggaggatttcaagccaattttccactatgaacaccccaatgccaac
atcatggatgaggatttcagcaaccgtttagagtggcatgggacaaaaaacaacgacata
caaataggagccatttacatccataacgtcacctttaatgaaacggggacattccgctgc
acaatccaccgcaccctcttcctgcggcagtacaatgagaacgtcactgtggagaaggag
gtggagctcactgtggtggctgtagccaatcgggagctgacatcggtgatcgcagagatc
atgatgtacgtgctgatcgtggttctgcagctgtggctcattggggttctgatctactgc
tacaagaagatttcagaagagtacgaagctcgggagacccacaaagctctcaaagctcag
gcagtgcttgcaaaagacaactgtgatggggtgcagctagagtga
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