Notothenia coriiceps (black rockcod): 104949124
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Entry
104949124 CDS
T04920
Symbol
nr1d2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104949124 (nr1d2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncc03310
]
104949124 (nr1d2)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104949124 (nr1d2)
Nuclear receptors [BR:
ncc03310
]
1. Thyroid hormone like
1D. Rev-Erb
104949124 (nr1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
104949124
NCBI-ProteinID:
XP_010773708
UniProt:
A0A6I9NEM8
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Position
Unknown
AA seq
613 aa
AA seq
DB search
MPEDMGTAKPGGVIAYISSGSASSPESCMSPSRSYLSTSQAVSRPSLPSRAVGMVVDISP
PTKNGHQRSHGIEKSGRSTSTKSNITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFFR
RSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRML
LEMQNAMNNMMSNNSQLHSMLHGHQSASPMEAMTSDAGSSPSSSSASDSLSSSNPSSPHC
PQDSESVVSMDTNSSSASSCASDSGEDESLIALNRQHQEAFAFGQQRAQRQGQASPTLSS
AALEVGGDGRAEEEEEQQQQQQQQQQQQQQQENWSCWNNNAVVGGYQQGSYSKVQHVSNT
AYSEEKVYQQQPQQLNSTLKCEPSDDSNTQHGFNTKPASTGYDGPTSCVNNRAYLVCPMN
ASPYVDPHKPSQEIWEEFSMSFTPAVRDVVDFAKRISGFCDLPEHDQVGLLKAGTFEVLM
VRFASLFNAVERTVTFLSGKRYSLDTLRALGAGELLNSMCEFSEKLAALRLDSEEMSLFT
AVVLVSADRSGIQDLNSVEALQDKLIRGLRNLVMQNHGEESSTTFTKLLLKLPELRSLNN
MHSEELLSFKVHP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggacatggggacagccaagcctggaggagtcatagcctatatttcctctggc
tctgcctccagtccagagtcctgtatgagccccagcagaagctatttgtccacatcccag
gccgtgtcccgcccctccctccccagcagggcagtgggcatggtggtggatatctctccg
cctactaaaaatggccaccaacgtagccatggcattgagaagtctgggcgctccacatct
accaagagcaacattaccaaaattaacggcatggtgctgttgtgcaaggtgtgtggtgat
gtggcatccggcttccactacggcgtccatgcatgcgagggctgcaagggtttcttcaga
agaagcatccagcaaaacatccagtacaagaagtgtcttaagatggagaactgcaccatc
atgagaatcaaccggaaccgctgccagcagtgccgcttcaagaagtgtctgtctgtcggc
atgtccagagatgctgtccgatttggccgcatcccaaagagggaaaagcaaaggatgctg
ctggagatgcagaacgccatgaacaacatgatgagcaacaacagccagctgcacagtatg
ctgcacggccaccagagcgcgtctcccatggaggccatgaccagcgacgccggctcctcg
ccctcttcctcctctgcttccgattccctgtcgagctcaaacccctcctccccgcactgc
ccccaggactcagagtctgtggtttcaatggataccaactccagctccgcctcctcctgc
gcgtcagacagcggagaggatgagtccctcattgctttgaacaggcaacaccaagaggcc
tttgcattcggccagcagagggcgcagcgacagggccaggcgtcgcccacgttgagcagc
gccgccctggaggtggggggtgacggccgggcagaggaggaggaggagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcaggagaactggagctgctggaacaacaat
gcagttgtgggggggtaccagcaaggttcttacagtaaagtccaacacgtcagcaacact
gcttacagcgaggagaaggtttaccagcagcagcctcagcagctcaacagcaccctgaag
tgtgagccgtcagatgacagcaacacacaacatgggtttaacacaaaaccggcctcaact
ggttacgatggaccaaccagctgcgtgaataatagagcatacttggtctgtccaatgaac
gcttcaccctacgtggacccccacaagccgagccaggagatctgggaggagttctccatg
agtttcacccccgccgtgcgggatgtggtcgactttgccaagaggatctcgggcttctgc
gacctcccagagcacgaccaggtcggcctgttgaaagctggaacttttgaggtgctgatg
gtcagatttgcctccctgttcaacgccgtcgagcggacggtgaccttcctgagtggaaag
cgttacagccttgacacgctgcgggcgctgggcgccggcgagctgctcaactccatgtgc
gagttcagcgagaagctggctgcactgaggctggactctgaggaaatgagcctcttcaca
gccgtggtgctcgtctcagccgatcgttcagggatccaggacctgaactcggtcgaggcc
ctgcaggacaaactgatccggggtctgaggaacttggtgatgcagaaccacggcgaggag
tcgtccaccaccttcaccaagctgctgctcaagcttcccgagctgcgttcactcaacaac
atgcactcggaggaactgctgtccttcaaagtgcacccttga
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