Notothenia coriiceps (black rockcod): 104949130
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Entry
104949130 CDS
T04920
Symbol
tbc1d9
Name
(RefSeq) TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104949130 (tbc1d9)
Membrane trafficking [BR:
ncc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104949130 (tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
104949130 (tbc1d9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
104949130
NCBI-ProteinID:
XP_010773716
UniProt:
A0A6I9NGP9
LinkDB
All DBs
Position
Unknown
AA seq
1283 aa
AA seq
DB search
MWVIPEDVLLAGALWITERANPYFILQKRKGHGNGGGGLAGLLVGTLDVVLDSSARMAPY
RILYQTPDSLIYWIIAHGTSRKEITEHWEWLENNLLQTLSIFENENDITTFVKGKVQGII
AEYNKNHDVKEDDDTDKFKEASAKFRKLFGMPEEEKLVNYYSCSYWKGKVPRQGWLYLSI
NHLCFYSYLLGKEAKLVMRWADITQLEKSATLLLPDGIKVSTRLSAHVFSVFLNINETFK
LAEQLANIAMRQLLDNKGFEQDRSLPKLKKKSPTKVSALKRDLDARAKSERYRALFRLPK
DEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEETLCSLIIPLREVTIVEKADSS
NVLPSPLSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYLEREFTGSLTSSDDEV
YSQHGSLLSSSPQNSVSSEGERTFNLNDSSVPTATQALMTMYRRRSPEEFNPKLAKEFLK
EQAWKNHFTEYGQGVCMYRTEKTKELVLKGIPESMRGELWLLFSGTINEMATHPGYYEDL
VEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNI
VTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELAREYVPQLYDCMQ
DLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYDGIKVIFQLALSVLHANIHQLLSCK
DDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLTDNGDPHPDVDIFKLVRSSYENFGSIR
ADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYVLFKAEHLTSCYWG
GSSNPTERHDPSLPYLEQYRMDVEQFRGLFNLLFPWANGAHSDPLALRFFRLLDQNGDAL
INFREFISGLGILCYGELTEKLKLLYKLHVIPEIPREEPDSAFEATQYFFEDIAPETSIG
HDSKSSSEKDDGFVRVTFKTEKVKKLKTPECRNYLKLWNQETKSKLENTKDLPKLNQSQF
IELCKTLYSMFSEDAAEQELYHATATVTSLLLEMGEVGKLFSPGRKDHNMEGKPEPDVCT
RDATEPKTNQEAEPEFQQRVQDDDFAPEGVESKQSPCEDEKQQQQEEGSEQLPPMQDIKL
EDSSPKDTGTSSAMLISDDETKDDTSMSSYSVLSAGSHELDEKLQCEDIADDTVLVRSDP
VGERGSAPHIGGAYDRGMPHSTSIDKDWTITFEQFLASVLTEQALVIYFEKPVEVAARIT
NAKNVRKVGRSLSSSDYDISLSG
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcattcccgaagatgtgttactggcgggcgcattgtggatcaccgagagagcc
aatccatatttcatactccagaaaaggaagggccacgggaatggaggcggaggactggct
ggtttgctggtcgggaccctggatgtggttttggactccagcgctcgcatggccccgtac
aggatcctctaccagacccccgactctctgatttactggatcatcgctcatggaacgtct
cgtaaagagatcacggagcactgggagtggctggagaacaacctgctgcagacgctctcc
atctttgagaatgagaacgacattaccacctttgtcaaaggaaaagtccagggcatcatt
gctgagtacaacaagaaccacgacgtcaaagaggacgacgacacggacaagttcaaggag
gcgagcgctaagtttcgtaaactgttcgggatgccggaggaggagaagctggtcaactat
tactcctgcagctactggaaggggaaagtaccgcgacagggctggctctacctcagcatc
aaccacctctgcttctactcctacctgctgggaaaagaagccaaactggtgatgcgttgg
gcagatatcacccagctggagaagagcgccaccctcctgctgcccgacgggatcaaagtg
agcacccgcctcagcgcgcacgtcttctccgtcttcctgaacatcaacgagaccttcaag
ctggcggagcagctggcaaacatcgccatgcggcagctgctggacaacaaaggcttcgag
caggaccgctcgctgcccaagctcaagaagaaatcccccaccaaggtgtcggctctcaag
agggatttggatgcgagagcgaagagtgagcgttaccgagcgctcttccgtctgcccaaa
gacgagaagctggacggacacacagactgcaccctgtggacgcccttcaacaagatgcac
atcctgggacagatgttcgtttccaccaactacatctgcttcaccagcaaggaggagaca
ctgtgcagcctcatcattcccttacgagaggtgaccatcgtggagaaggcagacagctcc
aacgtgctgcccagcccgctctccatcagcaccaagaacagaatgacattcctgtttgct
aatctgaaggaccgggacttcctggtccagaggatttctgacttcctgcagcagaccacc
tccaagatctacctggagagagagttcaccggcagcctgaccagctccgatgacgaggtt
tactcccagcatgggtccctgctctccagcagcccgcagaacagtgtgagctcagaaggc
gagcgcacattcaacctgaacgacagcagcgtgcccacagccactcaagctctcatgacc
atgtaccgccgccgctcacctgaggagttcaaccccaagctggcgaaggagttcctgaag
gagcaggcgtggaagaaccacttcacagagtacgggcagggagtgtgtatgtaccgcacg
gagaagaccaaggagctggtcctcaaggggattcctgagagcatgagaggagagctctgg
ctgctcttctctgggacgatcaacgagatggccacccaccccggatactacgaagacttg
gtggagaagtcgatggggaaatacaacctggcgacagaggagatcgagagggacctgcac
cgctcgctgcccgaacacccggcctttcagaacgagatgggcatcgccgcgctgcgcagg
gtcctcacggcctacgctttcagaaaccccaacatcggatactgtcaggctatgaatatt
gtgacctctgtgctgctgctctacgccaaagaagaggaggctttctggctgctggtggcg
ctctgtgagaggatgctgccagactactacaacaccagggttgtaggagccctggtggat
cagggggtgttcgaggagctggcccgtgagtacgtccctcagctgtacgactgcatgcag
gacctcggggtcatctccaccatctctctctcctggttcctcaccctcttcctgtccgtc
atgccgtttgaaagcgccgtggtggtggtggactgcttcttctacgatggcatcaaggtc
atctttcagctggcgctctccgtgctgcacgccaacatccaccagctgctcagctgcaag
gacgatggagaggccatgactgttctcggcagatacttggacagtgtgaccaataaggac
agcaccctccctcccatcccccacctgcactccctactgacagacaatggagatccacat
ccagatgttgacatcttcaaactggtccgcagctcctacgagaacttcggttcaatccgt
gcagatgtgattgaacagatgcgtttcaaacagagactgagggtcatccaaaccattgaa
gatacaactaaacgcaacgtggtcaggaccattgtaacagagactgccttcagcattgat
gagctggaggagctctatgtgctctttaaggcggagcacctgaccagctgttactggggc
ggcagcagcaaccccacggagcgccacgaccccagcctgccgtacctggagcagtaccgc
atggacgtggagcagttcagggggctgttcaacctgctgttcccctgggccaacggggcg
cactccgaccccttggccctgcgcttcttccgcctgctcgaccagaacggagacgcactc
atcaacttccgggagttcatcagcggcctgggcatcttgtgttacggggagctcaccgag
aagctgaagctcctctacaagctgcacgtcattcctgaaatccctcgcgaggagcctgac
tctgcgtttgaggcgacgcagtacttctttgaagacatcgctccagaaacatccatcggt
cacgactcaaagagcagcagtgagaaggatgatggttttgtcagagttacatttaagact
gaaaaagtgaagaaactgaaaactcctgaatgtcgcaattacctgaaactgtggaaccag
gagacaaaatctaaactggaaaacacaaaggatctccccaagctgaatcagagccagttt
atcgagctgtgcaagaccctctacagcatgttcagtgaggacgctgcggagcaggagctg
taccacgccaccgccaccgtcaccagcctgctgctggagatgggagaggtggggaagctc
ttctctcctggcaggaaggatcacaacatggagggtaaaccagagccagatgtgtgtacc
agagacgccacagagcccaaaacaaaccaagaggccgagcctgagttccagcagcgagtc
caggatgatgattttgcccctgaaggtgtagagagcaagcaaagcccctgtgaggatgag
aagcagcagcagcaggaggaagggagtgagcagctgcctccaatgcaagacatcaagctg
gaggactcgtcccccaaagacacgggcacttcctccgccatgctgatctctgatgacgag
accaaagatgacacctcgatgtcgtcttactcggtgctgagcgcgggctcccacgagctg
gacgagaagctgcagtgcgaggacatagcagacgacacggtgctggtgcgcagcgacccc
gtgggggagagggggagcgctcctcacatcgggggtgcctacgacagagggatgcctcac
agcaccagcatcgataaagactggaccatcacgtttgagcagttcctggcctctgttctc
actgagcaggccctggtgatttatttcgagaagccggtggaggtggcggctcgtataact
aacgccaaaaatgtgcgtaaagtggggcgctcgctgtcttcaagtgactatgatatctcg
ctatctggctga
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