KEGG   Notothenia coriiceps (black rockcod): 104949253
Entry
104949253         CDS       T04920                                 
Symbol
srf
Name
(RefSeq) serum response factor isoform X1
  KO
K04378  serum response factor
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    104949253 (srf)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncc03000]
    104949253 (srf)
Transcription factors [BR:ncc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    104949253 (srf)
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 104949253
NCBI-ProteinID: XP_010773877
UniProt: A0A6I9NBE3
LinkDB
Position
Unknown
AA seq 581 aa
MLPSRVGSAPSGNGSATGRGNTGHGSGVVGSGIRPVLVRAGQALAVVESIGRQGERDAVG
MLGANGPGGSRGVRPGNGTGVTTLQPAVQGNMVGLNQGGMPHGARFEERDVAPLCSGSDN
DSDSGDDDDPVGSLGDSRRGVKRERGEMEAAVSGQDVGMPPGGYGMVPGGVAGAKPGKKT
RGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATR
KLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESESMGDTK
DTLKPTFTVASLPGSAQCTVPTTSTTMQVSSGPSFPITNYLAPVSASSNISANGTVLKTT
SSGVMQLPSGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQASQHQQGQQAVFRFP
AAVSLSGAGLPQQLQAIQVHHNTTSNSDGSLDISHTSSNSTATVSLPATIVTSSMPTSVA
GHMMYPSPHTVMYASAPTLSDGSLAVLNAFSHGTSAMQVHGQGQDSGVPQVFLTAPQGTV
QIPVSAVQLHPMVIGQQSSGSSSNLTELQLVNLDAVQNSKD
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgttaccgagccgggttggatcggcaccatctggaaacggctcagctactggcagggga
aacacgggacacggttcgggggttgtcggaagcgggattcgtcccgttttggttagagca
gggcaagctttagcagtggtcgagagtatcgggagacagggggagagagacgccgtcggg
atgctaggggctaatgggccagggggttcgagaggtgtgagacccgggaacgggaccggg
gtgaccaccctgcagccagccgtgcagggcaacatggtggggctaaaccagggaggtatg
cctcacggagccaggttcgaggagagagatgtcgctcctctgtgcagcggctcggataat
gactcggactccggagacgatgatgacccagtgggttcactcggggacagcaggagaggg
gtgaagcgggagagaggagagatggaggctgcagtgtcggggcaggacgtaggcatgcct
cccgggggttacggaatggtgcccggcggggtcgcaggggcaaagccggggaagaaaaca
cgtgggcgagtgaagataaaaatggaatttattgacaacaagttaagacgttacaccacc
ttcagcaagaggaagaccggtataatgaaaaaggcgtatgaactctccaccttgacggga
acccaggtactgctgctcgtggccagtgaaacgggtcatgtctacacttttgcaacgcgc
aaactccaacccatgatcacgagtgaaacgggcaaagctctgatccaaacgtgcctcaac
tcaccggactcgccgccacgctccgacccctccacggaccagcgcatgagcgcgacgggc
ttcgaggagacggatctcacctatcaggtgtctgagtcggagagcatgggcgacacaaag
gacacactgaagcccacgttcacggtggccagcctgccgggcagcgcccagtgcacggta
cccaccacctccaccaccatgcaggtgagcagcgggccctcgttccccatcaccaactac
ctggcgcccgtctcggccagcagcaacatcagcgccaacggcaccgtcctgaagaccacc
agctcgggggtcatgcagctgcccagcggcttcaccttcatgcccgcaggcactcctctc
ccccccggcacccccaccattcctctgagccagctgcagcagcactccctggccctgcag
gggcagcatgggcaggcctcccagcaccagcagggacagcaggctgtcttccgcttccct
gctgctgtctccctctcaggagcaggcctcccccagcagctccaggccatccaggtacac
cacaacaccacctccaacagcgacggcagcctcgacatctcccacacctcctcaaactcc
accgcgacggttagtctcccagcaaccatcgtcacctcgtctatgccaacatctgttgcg
ggtcacatgatgtaccccagcccgcacacagtgatgtacgcctcggcgcccacgctgtcc
gacgggagtctcgctgtgctcaacgccttctcgcacggcacctcggccatgcaggtccac
ggacagggccaggactcaggtgtcccgcaggtgttcctcacagcaccccaaggcacggtg
cagatccctgtctcagcggtgcagctacacccaatggtgattggtcaacagtcgagcggc
agcagcagtaacctgactgagctccagctggtcaacttggacgcagtacagaactcaaag
gactga

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