Notothenia coriiceps (black rockcod): 104949434 Help Entry 104949434         CDS       T04920                                  Name (RefSeq) protocadherin-17-like isoform X1   KO K16499   protocadherin delta 2 Organism ncc  Notothenia coriiceps (black rockcod) Brite KEGG Orthology (KO) [BR:ncc00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ncc04515]     104949434 Cell adhesion molecules [BR:ncc04515]  Cadherins   Protocadherins    104949434 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_2 Cadherin_CELSR2_9th PepSY Cadherin_C_2 Motif Other DBs NCBI-GeneID:  104949434 NCBI-ProteinID:  XP_010774097 UniProt:  A0A6I9NC05 LinkDB All DBs Position Unknown AA seq 1140 aa AA seqDB search MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGLEQVGPGQGKKANFR VLENSAPHLIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQDI NDNSPAFPSDQIDIEISENAMPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVKS RGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGNMQINVKVIDSNDNSPVFDQ PSYIVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIKI QGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEAA PPATVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREAQDEYNV TIVAKDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYLLQIPENNIPGEYLGSVLAHDPD LGQNGTVYYSIMNSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLARDAGSP HLESNATVRISVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGESG RLTYEISDGNEEHLFEIDPVTGEVQTAHPFWDDVNPIVELIIRVSDHGKPTLTAAARLIV KASNGRPPDGLPRTKDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYNC RIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTRL PLSSPRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEPN YMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKATG VKPPPLEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGVDYRNNMFVPAGMETVPE AETYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASGSPTKSC STMSPCNSVKSPADGAEGKPPPATCSGHYGPPDGQYLSPTKQSRDQGVYPPLPPMDPVAK VLAEARSRISQEATGEMECVLEQVEPDASRDRMDADQVVRDIDKLLQDCRGSEATGTLRK NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtatctttctattttctttttcctcctcctatgggctcaagccctgacattgaagaac ttaaattactctgtcccggaggaacagggtccagggacagtgattgggaacatagccaaa gatgccagactcggacttgaacaggttgggccgggacagggtaagaaagccaacttcagg gttcttgaaaactcagcaccgcatctcatcgacgtggaccctcaaagcggactgctgtac acaaagcaacgcattgacagggaaaccttgtgtaagagaaaccccaagtgccagctctcc atggaggtgtttgccaatgacaaggagatctgcatgatcaaaatagatatccaggacatt aacgacaactcacccgctttcccctcggatcagattgatattgaaatttctgaaaatgca atgccagggacacgttttcccctgaccagcgcgcatgacccagatgcaggggagaacggc ctgaaaacctatcaaataacacgcgatgactacaatctattttcgttagaggtaaaatcc cgtggcgacgggactaaatttccagaattagttattcaacgaccattggaccgcgaagaa cgaagccatcacaccctcattttgtcagccacggatgggggcgaatatcctaggtcaggt aacatgcagataaatgttaaagttattgattccaatgataacagccctgtgtttgatcaa ccatcgtatattgtggaaattcctgaaaattctcctcctggtaaagtgctgatcgattta aatgccactgatcctgatgagggcaacaatggacaagtagtctattcttttagtggctat gccccagagagaatccgggagctcttttccatagattcaagaacaggggtcataaagatt cagggtgaaattgactatgaagagagcccagtcattgagattgacgtccaggcaaaggat ctaggtcccaatccaatcccaggccattgtaaagtcacagttaaagtgcttgacaggaat gataactggccatctataggctttgtgtctgtgagacagggagccatcagtgaggcagca cctccagccactgtcattgctctggtccgtgtcacagacaaggactcaggcaggaatggg cagcttcagtgcagagtgctgggtaatgtcccttttaaacttgaggagaactatgataac ttctatactgtagtaacagacaggcccttggacagagaggcgcaggatgagtataatgtc accattgtggccaaagacaacggcattcctcctctaaactccacaaaatccttcaccgta aagattctggatgagaatgacaatgttcctcgctttacgaagtcagtttaccttcttcaa atacctgagaacaacattcctggggagtacctaggttcagttctggcgcatgacccggac cttggccagaatggcacagtatactacagcataatgaactccaatgtgagtgggggtgat gtcaacacctatgttaatgtgaatgctgctaatggagccatctatgctgtgagatccttt aactatgagcaaatcaagtattttgactttaaggttcttgctagagatgcaggatcccca cacctggagagcaatgctacagtccgcatcagtgttctcgatgtcaatgacaacatccct gtcattgttctgcccctacttctaaacgacacggctgaaatccacgtgccgcgtaatgtt ggtgtgggctacattgtcaccacagtaagggccgtggataatgactatggtgagagcggg aggctcacttatgagatctcggatggcaatgaggagcacctctttgagattgatccagtg actggggaggttcaaacagcccacccattctgggacgatgtgaaccccattgtggagctg ataattcgagtatcagaccatggcaagccgactctgactgctgccgccaggctcatcgtc aaggcctctaacggacgtccccctgatggattgccacgcacaaaggacaatcagaactgg gacatgtccctgcctcttattgtaactctaagcatcatatccatcatgcttctggctgca atggtgaccatagcaatcaagtgcaagcgagaaaacaaggagatccgtacatataattgt cgcattgcagagtactcgcaccctcagctggggaaaggcaagaagaagaagattaacaag aacgacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtgatgaat gtggtaagcagcccttccttggccacctctcctatgtactttgactaccagacacgactg ccactcagctcaccaaggtcagaggtcatgtatctcaagcccactgccaataacctcagc gtgccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcactaca gatacacctactaaccgcatgtccatcatacagacggacaatttccccactgagcctaat tatatgggtagcagacaacagtttgttcaaagcagttcaaccttcaaagacccagagcga gcaagcctcagagacagtggtcatggtgacagtgaccaggctgacagtgaccaggacacc aacaaaggctcctgctgtgacatgtctgcaaaagaagccctcaagttgaaggctacagga gtgaaaccaccgcctttggagcaagatgaggactgtgtgaattgtacagaagagtgccgg gtactgggccattcggaccgttgctggatgccccagttccccgctggaggaaaccaggcc gagggagtcgactaccgcaacaatatgttcgtgccggcagggatggagactgtgcctgag gcagagacctacgagactgtcaaccccaatggcaagaagacgttctgtacatttggaaaa gaaaggcgtgaccacaccatcctagtggccaacgttaagccctacttgaaggcaaaacgc gccctaagtccactgctccaagaggtaccctcagcctctggtagtcctaccaagagctgc tcaaccatgtctccctgcaattcagtcaaaagcccagctgacggagctgaaggcaaacct ccccctgccacctgctcaggccattacgggcctcctgatggtcagtacctgtcaccaaca aaacaaagcagagaccagggggtctacccaccattgcctcccatggacccagtggccaag gtgcttgcagaagcccgctctaggatcagccaagaggcaacaggggaaatggagtgtgtg ctggagcaggtggagcctgacgcaagccgtgacagaatggacgctgaccaggtggtcaga gacatcgacaaactattgcaggactgcagaggaagtgaggccacaggcacactcaggaag tga

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