Notothenia coriiceps (black rockcod): 104949641
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Entry
104949641 CDS
T04920
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 53-like isoform X1
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncc03037
]
104949641
Cilium and associated proteins [BR:
ncc03037
]
Other cilia and associated proteins
Stereociliary proteins
104949641
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104949641
NCBI-ProteinID:
XP_010774333
UniProt:
A0A6I9NGX2
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MKWMEPMARSAHQLPPLSMSSRSKSPPNSGEAAGSNSMAWAKMFKKPGGGLKKSYQPGSM
LSLALTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSLRQLSGHFCLGDSCIFCALKSIFS
QFQQSRERVLPSDSLRNALAETFKDEQRFQLGLMDDAAECFENILERIHLHIVSDTSTDA
CSSKSCITHQKFAMMLYEQFVCRCCGASSDPHPFSEFVHYVSTTALCQQVERMLGKNERL
RSDMFGELLQAANNTGDLRSCPSNCGQSIKIRRVLMNCPEIVTIGFVWDAEQSDLTDDVI
RSLGPRLNLCGLFNRVTDENAKRSELHLVGMICFSSKHYSAFAYHTKSSKWMFFDDATVK
EIGSKWKDVASKCIRGHFQPLLLFYTNPEGSPVSNEDAPRQTTMCPRYKAQINGDMTAKH
PLGSPNKLQDPIMEHLQRPSETSKKDRGHRKTDSSQHKEMAHARSLSPPESGPRPPVDQK
CKSYPRAEKLSNHSSRGPQDQRGPSFGTQGGGHGRRNNTSPSRYDQDGCQEQWEKGGGEG
TRNKSKSTWRPIREVLNVDTVLNDLEQRRQQQHDSPRHSKPSSQEKVHKEQSRDHEREYV
RTREDRKQKCLMTIYEDEQRHETESHSSVESESRANQQRGSRLKGGPKTLLRSDTWIIQR
IESGYESSDRLSSGSTNPDSPGVDGFVVKDQRSTPEAELQSQLHQKGGDAKTSSTSSPSH
NGKHQPKPQGKNHDQVSHSHLKCSPSSRRKSKNTSTSRKAVSSERDSAGSDNRQSEQQDL
TNCRGHSVESTAQRHFTKTSSSEWNSSDDLALSEPEDRENSYRSSNIEASESQCPPMTLP
YHPPSNVTAEPLQLNSQRQLGTTGSPHLRTTPRIPPHQGETSHAVFRPRMLHQEPFPSSP
RLSSTSFVSLHRRPDISGLRTFSDASSKSGSDPERSTPSSCESEERLTVCRLEPATPAQE
VSLTTYFTVDNCMTETYRLKYHNQRPLVLSATMPRTVVVTERRDTSHTLPTDTYSQDVPK
ARPETSHNSNKPTAKWNPVTAKGLDERGFL
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggatggagcccatggccagatcagctcaccagctcccacccctcagcatgtcc
agccgcagcaagtctccccccaactctggagaagctgcaggctctaactccatggcatgg
gcgaagatgttcaaaaaacctggaggaggcctgaagaaatcctaccagcctgggagcatg
ctgtctctcgcgctcaccaaaggcctgctgaatgaacccgggcagaacagctgcttccta
aacagcgctgttcaggtgctctggcagcttgacatcttcaggaggagtttgaggcagctc
tcaggtcacttctgtctcggtgatagctgcatcttctgtgctctaaagagcatcttcagc
cagttccagcagagcagagagcgagtgctcccctccgacagcctgcgtaacgcgctagct
gaaacttttaaggatgagcaacgcttccagctcggcctgatggatgatgctgctgagtgc
tttgagaacatcctggagcggattcatttacacatcgtttctgacacgtcgactgatgca
tgctcatccaaatcctgcatcacccatcagaagttcgccatgatgctttatgagcagttt
gtgtgtcgctgctgtggagcgtcgtcagacccgcacccgttctcagaattcgtacattat
gtttcaacgactgcgttatgccaacaggttgagcgcatgttggggaagaacgagcggctc
aggtcagacatgtttggagaattgctgcaggcagcaaacaacacaggtgacctccgaagc
tgcccgagtaactgcggtcagagtatcaagatccgccgtgtgctcatgaactgtccagag
atcgtcaccattggatttgtatgggatgctgagcagtctgatctcacggacgatgtcatt
cggtcacttggcccacgactgaatctgtgtgggcttttcaatcgtgtcactgatgaaaac
gccaagcgcagcgagcttcatctggtggggatgatctgtttttcgagtaaacattactca
gccttcgcctatcacaccaaatcttcaaaatggatgtttttcgatgatgctactgtaaag
gagattggatccaaatggaaagatgttgcctctaaatgtatcaggggacatttccagcct
cttctcttattttacactaatcctgagggatctccagtttctaatgaagatgccccaaga
caaaccaccatgtgtcctcggtacaaagctcagataaatggtgacatgacagcgaaacat
ccccttggcagtccgaacaaactccaggatcccatcatggagcatttgcagaggccgagt
gaaacttccaaaaaggatcgagggcatcggaaaacagactcatcacaacacaaagagatg
gcacatgcaagatctctatctcctcccgagagtggacccaggccgcctgtggaccaaaaa
tgtaaaagctatccacgggctgagaagttatcgaaccattcgagcagaggacctcaggat
cagcgtggtccgtccttcggtacgcagggtggagggcacggccgcaggaacaacacctcc
ccaagtcgctatgatcaggatggctgccaggagcaatgggaaaaaggtggaggtgaagga
acccgcaataagtccaagtccacctggagacccattcgggaggtgttaaatgtggacact
gtgctgaacgacctggagcagcggcgtcaacagcagcacgacagcccgcgacacagcaag
ccttcgtcccaggaaaaagtgcacaaggaacaaagtcgagaccacgagcgggaatacgta
cgaaccagagaagatcggaagcagaagtgcttaatgactatttatgaggacgagcagcgg
catgagacggagagccacagctctgtggagtcagagagcagagccaaccagcagaggggc
agcagactcaagggggggcccaagacgctgctgcgtagcgacacctggatcatccagagg
atagagtctggctatgagagcagcgatagactcagcagtggctccaccaatcctgactca
cctggcgtcgatggctttgtggtgaaagaccagagatcaacaccagaggcagagttgcaa
agtcagctgcaccaaaaaggaggcgatgccaaaacaagttcaacgtcctccccttcacac
aatggtaaacatcaacccaaacctcagggaaagaaccatgaccaagtttcacattcacat
ctaaagtgcagtccaagttcgagacggaaatcaaagaacactagtacctccagaaaagca
gtttcctcagagagggactccgctggttcagataacaggcagagtgagcagcaggatctg
acaaactgtcgagggcactctgtggaaagtacagcccagaggcactttacgaaaaccagc
agctccgaatggaacagctccgatgatctggctctctctgagcccgaggacagagaaaac
tcataccgctccagcaacatcgaggcctctgaatcccagtgtcctcccatgactctgccc
taccaccctcccagcaatgtgactgcagaacctctccaactgaactctcagcggcagctc
ggcaccacggggtcccctcaccttcggaccaccccgcggatccctcctcaccagggggaa
actagccacgcagtgtttcgtccgaggatgcttcatcaagaaccctttccatcgagtcct
cgtctttcatccacgtcttttgttagtcttcacaggaggccagacatttcaggcctcaga
accttctcagatgcaagctccaagtcgggctctgacccagagaggagtaccccgtcgtca
tgtgaaagtgaggaaagactgaccgtatgcagattggaaccagcaacgccagctcaagag
gtttctctgacaacatacttcactgtggataactgtatgacggaaacataccgtctcaag
taccacaaccagaggcctcttgtcctctcagccaccatgccgcggacagtggttgtgact
gagcgcagagataccagccacacactccccactgacacatactcacaagatgtgccaaaa
gccagacctgaaacaagccataatagcaataaacccactgcaaaatggaacccagtgaca
gccaaaggactggatgaacgtggttttttatga
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