Notothenia coriiceps (black rockcod): 104949652 Help Entry 104949652         CDS       T04920                                  Symbol cic Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism ncc  Notothenia coriiceps (black rockcod) Brite KEGG Orthology (KO) [BR:ncc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ncc03000]     104949652 (cic) Transcription factors [BR:ncc03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     104949652 (cic) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HMG_box HMG_box_2 Motif Other DBs NCBI-GeneID:  104949652 NCBI-ProteinID:  XP_010774345 UniProt:  A0A6I9NIP0 LinkDB All DBs Position Unknown AA seq 1180 aa AA seqDB search MKSVRASHTSHSLEFICPSTRCMLEPRCGVAPVSVERSGPPDIERGSTSCLPPTNDNPPT PRGGADSETESDTDDPFSPGVANEATPSSGPLKRRTQSLSALPKDLDRKREKDHIRRPMN AFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPNEKQQYHDLAFQVKEAHFRAHP DWKWCNKDRRKSLSEGRGTPKESRERSMSESIDPHPDAQVLLEGKGGGSGWQGGSERRGG MFGGQYSRPRAFSQSAVHTLEQTERESELEKEGASSFRHRPLPQSMYHGEDVPSDDERMV ICEEEGDDDVMDDSCPEGSIDLKCKERVTDSDEDEPDGQHNFQPVVRSSLPSSSPPILTS AKGNGEGGGGGEEGSERNRKRGTDRGEEGSEGRAKREETAAGERGVSPTSSPKALAHQGV TQVLGAVRVAPTMVTNVVRPIASTPIPIAIKPIEGSATLSSVPQDKKSTLLIGGGGPQLL PITAGGGYLSSSSSPGPVSVTPMGGLVTSLVLGGSFPVAQPVQLLATEQPHAQTPLPALQ PQLHPSAATSSLTPPAGPKPIAQAPYILPTENPSSPQLTHQQILSLPTNASLPNGMHSGV GLRVASVSPGTRVQTQSPGLPSKMLVPMATVRSGSTPPHPSISLVAPPLPVQNGAATGNK IIQIAPMPVVQTSVHPGGAAAVHSGSPFPVSVATVMTPGAAPPQTVLLTSPPTRITYVQS GPGVTQATPQQATPPLGSAYLQSSLATLGFTAIAPVGLTLVQPPLLAQAPPLSCQSQTPP VQASATAGRQVLTAIYPAPPASLPTGVVSVAPAPPAVAPAAQDVMDPSSPLQTGVQGSAA VTLQPYEAVKVKVEVKKENLLDGPPEDGGQELSSLAASSLLTIYETAVKKEEDVGRYIKE EYLSKEAGPRTPPPPPPFGTPLPPPAEREPPSSSKKTKFRPPPLKKTPDSHEKVLSETYF EERFAELPEFNPEEVLPSPTLQSLATSPRAILGSYRRKRRNSTELEVTAEEPSSPRRKTR RLSSCSSEPNTPKSAAKCEGEFFTFDRAGTEGEDLLGDLDRVPYSSLRRTLDQRRALVMQ LFQEHGFFPSAQATAAFQARYSDTFPSKVCLQLKIREVRQKIMQTATPGTLELGVLAGLA EVSPTPPHSSSFNQSAREEGGAEQHRDKGRNPEGPKSEGL NT seq 3543 nt NT seq  +upstreamnt  +downstreamnt atgaagtcagtccgagcttctcacacctcccacagtttggaattcatctgcccatcaacg cgctgcatgctggagcctcgttgcggtgtggccccggtgagtgtcgagcggtccggccct ccagacatagagaggggatccacgtcctgccttcccccaaccaatgacaatcctcctaca ccgaggggaggggctgacagcgagacggagagcgatactgacgacccgttttccccgggt gtggccaacgaggcaacgccctcctctggccccttgaagagacgcacacagtccctcagc gccctgccaaaggatttagacaggaagagggagaaggaccacatccgccgacccatgaac gcattcatgatcttcagtaaacgccacagggccctggtgcaccagcggcatcccaaccag gacaaccgcaccgtcagcaagatcctgggggagtggtggtacgctctgggacccaacgag aagcagcagtaccacgatctggccttccaggtgaaagaggcccacttcagagcccaccca gactggaagtggtgcaacaaggaccgcaggaagtctctgtcagagggccgtgggacgcca aaggagtcacgggagaggagcatgtcggagagcatagatccccatccagacgctcaggtg ctgctggaggggaaggggggaggctcgggctggcaagggggatcagagcgtcgaggggga atgttcggggggcagtactcccgtccccgagccttttcccagagtgccgtgcacaccctg gagcagacggagagagagagcgaactggagaaggagggtgcgagttctttccggcacaga cccctccctcagtccatgtaccacggcgaggacgtgcccagcgacgatgagcgtatggtc atctgtgaggaagaaggagacgatgatgtcatggatgactcctgtcctgaaggctccatt gatctcaagtgtaaagagagagtgacagacagtgatgaagacgaaccagatggacagcat aacttccagccagtggttcgctcctctctcccttcttcctctccccccatcctaacctca gcaaaagggaatggagaaggaggaggaggtggtgaagaggggtctgagaggaacagaaag agaggtacagacagaggagaggaggggagcgagggaagagccaagagagaggaaacagca gcaggagaaagaggtgtctccccaacatccagccccaaggctttggcccatcagggtgtg acccaggtcctaggagccgtccgtgtggctcccactatggttaccaacgtggtacgaccc atcgccagcacgcccatccccatcgccatcaagccaatagaaggatccgccaccctcagc tcagtgcctcaggacaagaaatccactctcctgattggaggaggaggacctcagctgctg ccaatcactgcagggggtgggtacctgtcctcatcctcctcccccggtccagtcagtgtc actcctatggggggtctggtcactagtctagttctgggagggtcctttcccgttgcccaa ccagttcagctcctcgccactgagcagccgcacgcacaaacccccctccccgccctgcag ccccagctccacccctctgccgccacctcctccctgacaccccccgccggccccaagccg atagcgcaggccccctacatcctgcctaccgagaacccctcctcccctcaactcacccac caacaaatcctctccctgcccaccaatgcctccctgcccaatggcatgcactcaggggtg ggactgagagttgcatcagtcagtcccggaaccagagttcaaacccagtcgccgggtttg ccgagcaagatgttggttcccatggcaacagtgagatcaggatctactcctcctcatccc tccatttccctggtcgctccgcctcttcctgtgcagaacggcgccgccacaggaaacaag atcatccagatcgctcccatgcctgtggtgcagaccagcgttcaccctggcggcgcagca gctgtgcactcagggagcccttttcctgtttctgtggcgacggtgatgactcccggtgca gcgcccccacagacagtgcttctgacctctccacccaccaggatcacatatgtccagtct ggtccaggagtaacccaggcaacaccccaacaggccactccccctcttggctctgcgtat cttcaatcatccctggcgaccctgggcttcaccgccatcgccccggtcgggttaactctg gttcagcctccactgttagctcaagccccgcccctcagctgtcaatcacagacccctcca gttcaggcctcagcaactgctggtcgtcaggtactaactgccatctaccctgcaccaccc gcttctctgcctactggggtggtctctgtagctcccgcaccacccgcagtggcccccgcg gcccaggacgtgatggacccttcctccccgttacagacgggggtgcagggttcagcggcg gtgacccttcagccttacgaggcggtgaaggtgaaggtggaggtgaagaaggagaacctg ctggatggtccgcctgaagatggaggacaggagttatcaagcttagctgccagttcctta ttgactatttatgaaacagcagttaaaaaagaggaggacgtcggtcggtacatcaaagaa gagtacctcagcaaagaggctggacctcgcacccctcctcctccacccccgtttgggacc cccctccctccccctgcggaaagagagcccccctcttcctcaaagaagaccaagttcaga cccccgccgctcaaaaagacaccggactctcacgaaaaggtcttgtcggagacgtacttc gaggagcgttttgctgagctcccagagtttaacccagaggaagtcctgccttcgcccact ctgcagagcctggccacctcgccgagagccatcctggggagctaccgcaggaagagacgc aactccaccgagctggaggtgacagcagaagagcccagctccccgaggaggaagacccgc cgtctctccagctgcagctcggagcccaacacccccaagagcgccgccaagtgtgaggga gagttcttcaccttcgacagagcaggtacagaaggagaggatctgcttggagatctggac cgggtcccctactcgtctctgcgcagaactctggatcagcgccgggccctggtcatgcag ctgtttcaggaacatggcttctttccctcagctcaggccacagctgccttccaggcacgt tactcggacaccttcccgtccaaggtgtgtctgcagctgaagatccgcgaggtccgtcag aagatcatgcagacggccacacccgggaccctggagctcggagtgttagcggggctggct gaagtgagccccaccccgccccacagctcctctttcaatcaatcagcgcgggaggaggga ggggcggagcagcaccgagacaaaggccggaatccagaggggccgaaaagcgaaggattg taa

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