Notothenia coriiceps (black rockcod): 104949793
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Entry
104949793 CDS
T04920
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
ncc03015
mRNA surveillance pathway
ncc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104949793 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
104949793 (rbm8a)
03015 mRNA surveillance pathway
104949793 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104949793 (rbm8a)
03041 Spliceosome [BR:
ncc03041
]
104949793 (rbm8a)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104949793 (rbm8a)
Spliceosome [BR:
ncc03041
]
Complex C
Other components
EJC/TREX
104949793 (rbm8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
104949793
NCBI-ProteinID:
XP_010774500
UniProt:
A0A6I9NJ31
LinkDB
All DBs
Position
Unknown
AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNAQDMMGQPISVDWGFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttggatcttcatgaagcgggaggcgaggactttcctatggatgaggat
ggtgatgagagcatccacaaattaaaggagaaggccaagaagaggaaaggacgaggcttc
ggctcagaggaaggagccaggtccagaatcaaagaagactacgatactgtggagcaggac
ggtgacgaaccaggccctcagagatctgtggaaggctggatcctatttgtaacaggtgta
catgaagaggccacagaggaagacatccatgacaagttttcagagtttggagaaatcaaa
aacctgcatttaaacctcgaccgcagaacaggctacctcaagggatatgctctggtggag
tatgagacatacaaagaggcccaggcagccatggaagggctcaacgctcaggacatgatg
ggccagcctatcagtgttgactggggatttgtcagagggccccccaagaacaagaggagg
actggtggacggagacgcagcagaagtccggacaggaggcgtcgttga
DBGET
integrated database retrieval system
