KEGG   Notothenia coriiceps (black rockcod): 104949960
Entry
104949960         CDS       T04920                                 
Name
(RefSeq) protein Tob1-like
  KO
K14443  protein Tob/BTG
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104949960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncc03019]
    104949960
Messenger RNA biogenesis [BR:ncc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104949960
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     104949960
SSDB
Motif
Pfam: BTG PAM2 SinI T2SSM
Other DBs
NCBI-GeneID: 104949960
NCBI-ProteinID: XP_010774706
UniProt: A0A6I9NJM8
LinkDB
Position
Unknown
AA seq 332 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKKKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEQAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNEN
GSELDKEIKNSFNPEAQVFMPISDPVGASSESSSPSPPFGQSAAVSPSFMPRSTQPLTFT
TATFAATKFGSTKMKSNGRGNNTNSGSSSKVARTSPTNNLGLNVNTLLKQKAISTSMHSL
YGLGLGQQQQKASALSPNAKEFVFPNLQGPASPGAVFPGEGSPGLGPLQYSNAFDVFAAY
GSLNDKSLMDGLNFSLSNMQYSNQQFQPVMAN
NT seq 999 nt   +upstreamnt  +downstreamnt
atgcagcttgaaattcaagtagcactcaactttattatttcctatttatacaacaaactc
cctcgacgacgtgtgaatatcttcggcgaagagcttgagaggcagctgaagaaaaaatat
gaaggccactggtatccagataagccatacaaaggttcagggttcaggtgcatccatgta
ggggagaaggtggaccctgttgtggagcaggcagccaaagagagcgggctggatatcgaa
gatgtccggaataatctccctcaggaccttagtgtgtggatcgacccatttgaggtttcc
tatcagattggggagaagggaccggtcaaggtgctttatgtggatgataacaatgagaat
ggctcagagctggacaaggagatcaagaacagctttaatcctgaggcccaggtcttcatg
ccaatcagcgaccccgtcggggcttcctcagagtccagctccccctcccctcctttcggg
cagtcggctgctgtcagcccctccttcatgccacgctccacccagcccttaaccttcacc
actgccacctttgctgccaccaaatttggctccaccaaaatgaagagcaacggccgcggc
aacaacactaacagcggcagtagcagcaaagtggcccgcacttcccccaccaataacttg
ggtctgaatgtcaacaccctactgaagcagaaagccatctccacctccatgcactcactg
tacgggctgggcctgggtcagcagcaacagaaggcctctgctctttcccctaacgccaag
gagtttgtgttccccaacctccagggcccagccagccccggagctgtgttccccggggag
ggctccccgggtctcggccccctgcagtacagcaatgcctttgacgtgtttgcggcctac
ggaagcctcaacgacaagtcccttatggatggcctcaacttcagcctgagcaacatgcag
tattctaaccagcaattccagccagtcatggctaactaa

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