Notothenia coriiceps (black rockcod): 104950096
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Entry
104950096 CDS
T04920
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type isoform X1
KO
K12557
myosin-binding protein C, slow-type
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104950096 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104950096 (mybpc1)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104950096 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Ig_DSCAM-DSCAML_C
THB
V-set
Pur_ac_phosph_N
Ig_CYK3_C
PHD_4
Motif
Other DBs
NCBI-GeneID:
104950096
NCBI-ProteinID:
XP_010774853
UniProt:
A0A6I9NIB1
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MPEPTKKDEMANGQPEESVAPESNGAMPLPEITLEVSPPTDEDSAATATPSPTPHAESVT
PVSNGAMPLPEITLEVSPPTDDDAAAATTLSPKPHAEDAISLKKLSIELPHDSVPVPAMG
RKDSVWSLGDGQGPDDLEKPIDSPPRSTLLIESPQSATIPVGGDITFVAKVEAKDLLRKP
TIKWIKGKWMDLASKTGKHLQLKETFERLTKIHTFEMHIVKAKDNYAGNYRCEVTYKDKF
DSCCFELEVKEAEGSQNFDIRSAFKRSSEGQEDAGELDFSGLLKHRNQREPKADEGPDVD
VWEILKNARPDQYEKIAFMYGITDLRGLLKRMKKITRVEKKTEAFAKKLDPAYQADKGGK
IRMVVDLADPTVELKWYKNGQEIRSSPNQRKYIFEHKGTQRIMVINNCSLNDDAAYSVAA
GDENCATELFVKELPVKIVKNIEPVKTTVNERIELECEVSEEGAQVKWMKNGVEVPTGVR
SRYRVKCEGTKHFLVIDDASREDTGTYSIMATGGTSEARIQVDLKPLKIFQDLQDMKVML
GQPINLHCEIFPGNVAGRWYRNGQLIQPNDRINIVHKNKVHRLEVATSTLHDTGDYTFVP
EGYSQSLSAKIHIIDPPRVHLESLNFPDNTVTIVAGNKLRLEIPITGEPAPRVVWMKGER
VILESGNRVRAETYGDQTSLTIDVTEREDTGNYKIVLQNEAGEATASVKVKVVDIPDPPE
APLVPVVGGDWCSMTWEPPKYDGSSPILGYYIERKKKQSSRWMRLNFDLIKETSFEPKKM
IEGVPYEVRIFAVNAIGSSRPSEPSKAFTPLAVTSEPTMLVVDDVTDTTVTVKWRPPETI
GAAGLDGYLVEYCVEGTDDWVVSNNELTEKTKFTITGLTPGTRILVRVKAINAAGASSPR
TLQHHVMVKEVIEPPKIRVPRHLKQTYTRRVGEAVNLVVPFMGKPRPKVNWLKEGQPIEP
THVNIRNTDCDSIIFIRKAERSHSGKYEMTVQVENHVDTAILDIQVVDLPGPPQSVTIED
VWGGNVALVWTPPKDNGNAPITGYTIQKADKKTMEWFTCIEHYHRSCITITELVVGNEYF
FRIFAENMCGLSETATQSKKSALIVKEGMQVKTHEFTDHDFMEAPKFTQPLINTFAIAGY
NATLNCSVRANPRAKVVWMKNKITILDDPRYRMFSNQGVCTLEIRKPSPYDGGTYTCKAV
NDLGEAQVDCKLEIKGGFTFFELMQRGVPLHLIDKYMNEKVVEPQK
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcccacaaagaaagatgagatggcgaatggccagccagaagaaagtgttgcc
ccagaaagtaacggtgccatgcccctacctgagattaccctggaggtttctccaccaaca
gatgaggattctgctgcaaccgctaccccatccccaacaccccatgcagaaagtgttacc
ccagtgagtaatggtgccatgcccctacctgagattaccttggaggtttctccaccgaca
gatgatgatgctgctgcagccactaccctatccccaaaaccccatgcagaggatgccatt
tcactcaagaaactctcaattgagctgcctcatgatagcgtccctgtgccagccatgggg
agaaaagactcagtgtggtctctgggagacggccagggcccagatgacctggaaaagcct
attgacagcccaccaaggtccaccctactgatagagagtccacaaagcgccactatccct
gtgggtggagacatcacctttgttgccaaggtagaggccaaagatcttctccgcaaaccc
actatcaaatggatcaaaggaaaatggatggatcttgctagcaagacaggaaagcactta
cagctgaaagagacctttgaacgactgaccaagattcacacatttgagatgcacatcgtc
aaagccaaagacaactatgcaggaaactacaggtgcgaagtcacctacaaggacaagttt
gacagctgttgctttgaattggaagttaaagaagctgagggctcacagaattttgatatc
cgatcagctttcaaaagaagcagtgaaggacaagaagatgcaggggaacttgactttagt
ggtctccttaaacatagaaatcaaagggagcccaaagcggatgaaggtccagatgttgat
gtgtgggagatcctgaagaacgcccggccagatcagtatgagaagattgccttcatgtat
ggcatcacagatctgaggggtctgctgaaaaggatgaagaagatcacaagagtggagaag
aaaactgaagcttttgccaagaaactggatccagcatatcaggcagataaaggtggaaag
atccgcatggtggttgatctggctgaccccacagttgagctgaagtggtacaagaacgga
caggaaatcagatccagtccaaatcaaagaaagtatatctttgagcataagggcacacaa
aggattatggtcatcaacaactgctccttgaatgatgacgcagcttattctgtagctgct
ggagacgagaattgtgccacagagctgtttgtcaaagagttgccagttaagatagttaaa
aacattgagccggtgaagaccacagtgaacgagaggattgagctggagtgcgaggtgtca
gaggaaggcgctcaggtcaaatggatgaagaatggtgttgaggttccaactggagtgcgc
tccagataccgagttaagtgtgagggaacaaaacatttcttggtgattgatgacgcctcc
cgggaggacactgggacatactccatcatggctaccggtggcacatctgaggcccgcata
caggttgacttgaaaccgctgaagatatttcaggacttgcaagatatgaaggtgatgctg
gggcaacccatcaatctgcactgtgagattttcccaggcaacgtcgcaggtcgttggtac
aggaatggacagctgatccagcctaatgaccgcatcaacatcgtacacaaaaataaggtc
catcgtcttgaagttgcgaccagcactcttcatgacacaggggattacacttttgtgcct
gagggatattcacagagcctctctgccaaaattcacatcattgacccaccgagggtgcac
ttggagagtttgaactttccagacaacacagtgacaattgtggcaggaaacaaacttcgc
ctggagatccccattactggagaaccagcgcccagggtggtgtggatgaagggagaaagg
gtgattcttgagtctggcaatcgtgtccgagctgaaacgtatggcgaccagaccagcctt
acaattgatgtaacagagcgggaggacacaggcaactacaagatagtcctgcagaatgag
gctggtgaagcaacagccagcgtcaaggtcaaggttgtagacatccctgaccctccggag
gctcccttggtcccagttgttggcggtgattggtgctccatgacatgggaaccaccaaaa
tatgatggaagttctccaatattaggctactacatcgagagaaagaagaaacagagctcc
agatggatgagactgaactttgatctgattaaagaaacatccttcgaacccaagaagatg
attgaaggagtgccatatgaagtgcggatctttgcagttaatgctataggctcgtccagg
cccagtgaaccatccaaagcctttacccctctcgctgtgaccagtgagccaacaatgctg
gttgtggacgatgtcaccgacacgacagttacagtaaagtggcgtcctcctgaaaccatc
ggagctgccggtctggacggatacttagtggagtactgcgtagaaggaactgatgattgg
gtagtatccaacaatgagttgaccgagaagaccaagtttaccatcactgggctgactcca
gggactagaatcttagttcgagtcaaagccatcaatgctgccggagccagctctccacgg
acccttcagcatcatgtcatggtcaaagaggttattgaaccacccaagatccgcgttccc
cgacacttgaagcagacatacactcgtagagttggagaggcggtgaaccttgtggtgcca
tttatgggcaaacccaggccaaaagtcaactggctgaaagagggccagcccatagagcct
acccacgtcaacatccgcaacacagactgtgacagcatcatctttatccgtaaagcagag
cgcagccactccggaaagtatgagatgactgttcaagttgaaaaccatgtggacacggcc
attcttgacatacaagttgtagacctacctgggcctcctcaaagtgtcacgattgaagat
gtttggggaggaaatgtagctctggtctggactcctccaaaggacaatggcaacgcccca
ataacaggctacaccattcaaaaagcagacaagaaaacaatggaatggttcacatgcatt
gagcactaccatcgctcatgcatcaccatcacagagctggtggtagggaatgagtacttc
ttcaggatctttgctgagaacatgtgtggcctaagcgaaactgccacgcaaagtaaaaaa
agtgccctcatcgtcaaagaaggcatgcaggtgaaaacgcacgagttcacggaccacgac
tttatggaggcaccaaagttcacacagccgctgatcaacacttttgctattgccggctac
aacgctactctaaactgtagtgtccgtgccaacccaagggctaaagtggtctggatgaag
aataagataaccatcctggacgacccacggtaccgcatgtttagcaaccagggagtatgt
actctggaaatcaggaagcccagtccctacgatggcggcacgtacacttgcaaggccgtc
aacgatctgggtgaggcccaagtggactgcaagctggagatcaaaggaggcttcaccttc
ttcgagctcatgcaacgcggagtgcccctacacctgattgacaagtacatgaacgagaag
gttgtggagccacagaagtaa
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