Notothenia coriiceps (black rockcod): 104950116 Help Entry 104950116         CDS       T04920                                  Name (RefSeq) golgin subfamily B member 1-like   KO K20478   golgin subfamily B member 1 Organism ncc  Notothenia coriiceps (black rockcod) Brite KEGG Orthology (KO) [BR:ncc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ncc04131]     104950116 Membrane trafficking [BR:ncc04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Rab associated proteins     104950116 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ATG16 Motif Other DBs NCBI-GeneID:  104950116 NCBI-ProteinID:  XP_010774893 UniProt:  A0A6I9NIF0 LinkDB All DBs Position Unknown AA seq 3032 aa AA seqDB search MFSRLATVLQELSGEEGQDGDPQQGMLVPQLPAGEGQAPGESEAPEEALERLAHLEQLVV QLKELIREKDTELSDKDAKLKNEKDEAEARFTKLKLQAKAKMASLSKQITELKGQGGAPQ SPDSSFTGAGPAVEEELQELRNRLREEEANSRELQERLQTTEKTLQDKECAHAEQLQKLQ AVVCEKDVRFQEQIQKHEEELLGVTAQSQSDGQLQQALNAAQRRCEELEEAFNSRSQVLE MLQQEVSSADQQKQILTAQFRQMEQELAEAALQREEERQQWSGQASRADAEVAALRSSLE DLERDRAELVRQDGELAALREAEHGNVEALERERMEFARLERELSLMKEAEFAAVQASHD ASESDRAEILRLESELASLREAVVHSSEDASEREQSEVDKLEQELASLKEEHEDAQKKGE VLAEIWKHLRFLAVEDEQAAEEVPVPSDLSLFLDTVQTIETQLTRLREERSESEERCAHL THTMETLHDQLDRNTTEHEETAARVQQLEHNIITTPERDDVTEPSGQDSTEAKHEHILEL EQQLLERDNELLALRESLRQATEQSASGVASSENYEQTPDQGQDADTPPHDSSAALSGFM EDSRDDETTLVAEDTSVFSMSAGTESSPELIGDQSESPEESKGASSDEMVASSDSEVAHS SWTLLEALNQDGGQEWPSNLQDFSQLQSWEATSMEQETSTVQVESSSVIIRETVQVHVTQ QSSSTTEGIISSGQVFAQALAEELQKRYGEILAELQGLREAAAESQENIKSLEEETQYLT AAKEEAESQSNRFEEELQSTREEMEKLSQNSSSGVEKYGVEMQLLEEQIDILSSGSKTKE ERIQALQADLETAQQAFSEQEGHVRMLSAQLEDRELLSSELQRRLQEIENSMLESSQTSE LNNDTLSKKDTEISELQLLLGQKEQEATELNDSMSAKLLQAEEEKFQRNGEVKSLKEQIV DFEKVRDEKQKETSEDSGAQVDDELTSVRKEKGVLETQLMTTKKKLQAALVQRKELMKKV ADFDVEVKTLKEREVETPADIPEAEQSRGQEIQEMEAKLLELQQTLRTKEEAVEALDLKM TQQDQVLTETLAVNKKLIEEAENSQQADGPPEITALQSQLASLEAECETLQKKVQEAQES RKETIRKAKEKDRHHREQLKQQKEEYSELVERSEEQSAEREVLLTKLRELEEQISTEPPK EAKQLAEHMEKQATSDWVQEEWVDFATSETDSSQPQASHPVQQPAEQSLFSEQIDESLQA LRAEIQSVRMANAELEKQLLETHTSLSMKEAELLELGEELQALREKERQIDALSEEVNDL REKFHQAEAYAETLKAEMEIAAKATSEDSTTSITTLQAEVEDFKEFLDNKNLEIMELGQQ LSEQKSLIHSMQDTVSQKDQLIVSLQEELNAEQEKSQRLEVEVPQKQEEGKDSEAKVQQL QRKLQAALISRKEVLKENKTKKEQLAETEKLIKKLKHKMESAENELEKLRAERVRLIDEV DRTLVENQSLGSTCESLKLAMEGVVSEKDACKREVELAKEEAAKACREWEEKVQGMKDEY ETLLKSYENVSDEAERVRRVLEAARQERKDLATKVRAHEAGRQEAERQGEEAQKEVDLVK DKMRKFAKGKQQKIMELEEENERLREMQDKTVVKREGRTLKAEAERLQDELGALKADLDS TVAERDSLGQQIEELKEQLAQTGPTEDTITNAAVEEEVVTAQQSDITMTTAEPVESQNED KETQAEQIAAAPAPETHSEEKSEMTESVLLEEKMREMEAAVNSERKLWQEQEARLKAELG SLERDLQESKEKGSLVASLEKCLQEGKERERSLVEEGAKREAQFKELLRSLEAEKDNLEE RLMNQLAQLNGSIADYQQEAADNREHLTELQREVERLARERAELEAEAQSESDRAARLEE DMRQAQRERAEAEAESGKQRELEQQLRSAQRVREGSQSRARQLEELLREKQLEVRQLQRD CIKYQERISEMGRDAKALQQGYNELQNKLEQSQLETSKTLEXLKSGGPGTHGVQGYGGAH SGGPLPLNRVREGSQSRARQLEELLREKQLEVRQLQRDCIKYQERISEMGRDAKALQQGY NELQNKLEQSQLETSTTLEDLKRTEAECDSCKSQLDESRKQASVAIVERSTMEQNAQHRE ASMKAEAEQTLDSVRFRLGGELKEMELRLDEVDRERDKEEEATLEAREVARAAERRAQEL QARLDESLARLAAFSRCMSSLQDDRDRVLDETKQWETRFSDSLQGKEAEVREAETRAKDL AEQLQRESALKLQLQLSVDRLEKAEKDLKLKLEGEEKKVSESQAALEEVKNKLQQTTSEL QAAQSEAHALTREAESLNQRARALEEAVGRLQGEVDQARTELSEREAEERRLCLNVEQLE TDLRSSKALTESLQTELNEKERREVEMLGEKEHAVAQAAEEARKEADSRAKEAEEELEQR RGELRDLEEKLRKAEEESNNRKTKLDSFMKAMGSLQDDRDRVLNMYKQLEEKHLQVMLEK DGLIQEAAGENNSLKEELRSLLVQRDDLYAERSQLSAQLHGYRDELNQVLSMKDSQHKQL LAAQRARIAELESQVKSVIRAGETGAEAVKVERESLSQAAPQVIDAPGAEVEKLREQLQA AREQVEALEERLQTERQEQQGRSKELSELRWEGGVMRTESENAQERVAELARDLLAVEQS LLAEREMTTQLRAENQSFSKAMASLQDSRDQALNKAQELSLRLEEMSKAGGVPVPSSPGG STGEVWGLKNALQALQNDRERLLEQLQTQATELKKLKSELARLGAGELIKVSQELYEERK RNEDMLSIIMQLENVAEMGKQQIETLRLERMDWMAQAEQLKQQTLTTLSERDQQLRQLSA MLEEARTQKPKLQQEHYQREGTEEVDSAPGAPQERSSLSDSHAYIAEVKELQGRLDQEMQ QRVAAEEQLMATQDQLKRHSQGTWHSAQEEDHSETAVFIEQEGAVTRARRGGPSLMRMLR GAFCSRQRTPLLLSLYLLTVHILLLLCLGGLL NT seq 9099 nt NT seq  +upstreamnt  +downstreamnt atgttcagccgtctggccacagtcctccaggagctctctggagaggagggccaagatgga gacccacagcagggcatgctggtgcctcagctccccgccggtgagggccaggctccaggg gagtcagaggcccctgaggaggccttggagaggctggctcatctggaacaactggtggtc cagctgaaggagctcatccgagaaaaagacactgagctgtctgacaaagatgcaaagctc aagaatgagaaagacgaagctgaggcccgcttcaccaaactcaaactgcaggccaaagcc aagatggcttcactcagcaaacagatcactgagctgaaaggacaaggaggggcaccgcag agtccagacagctctttcactggagccggtcctgcagtcgaggaggagctccaagaactg aggaacaggctgagggaggaggaggcgaacagcagagagctgcaggagcgactccagacc acagagaaaacccttcaggacaaggaatgtgcccacgctgaacagttgcagaaactgcag gctgtggtctgtgagaaggacgtgcgtttccaggaacagatccagaaacatgaagaagag ctgctgggggtcacagcacagtctcagagtgacggccagcttcagcaggccctgaatgca gcacagaggcgctgtgaggagctcgaggaggccttcaactctcgatcccaagtgctggaa atgctgcagcaggaagtgagcagcgctgatcaacagaaacagatcctgactgctcagttc cggcagatggagcaggagctggccgaggccgccctgcagcgggaggaggagaggcagcag tggagcggacaggccagcagggccgatgcagaagtggcagccctcagatccagcctggag gacttggaaagggacagggcggagctggtgaggcaagatggtgagctggccgctttgaga gaggcagagcatgggaatgtggaagctctggagagggagaggatggaattcgccagattg gagagagagctgtctctgatgaaagaggctgaattcgcagctgtacaagccagccatgat gcttcagagagcgacagggcggaaatactgcggcttgaaagcgagcttgcatccctgaga gaggctgttgttcattccagcgaggacgcttcagagagggagcaatcagaagtagataag ctggagcaggagctggcctcactgaaggaggaacatgaagatgcccagaagaagggggag gtcttggctgagatttggaaacatcttcggtttttggctgtcgaggatgagcaagcagcg gaggaagtccccgtcccttctgacctctccctgttcctggacactgtgcagactattgag acacaactgaccaggctgagagaggaacgcagtgagagcgaggaacgctgtgcacatctc acccacaccatggaaacccttcatgatcaacttgacagaaataccacagaacatgaggaa accgctgccagggtacaacagctggagcataacattataacaacacctgaaagagatgat gtgactgaaccatcgggccaggattcaactgaagctaagcatgagcacatactggaacta gagcagcagcttttagaaagagacaatgagctgctggccttgcgagagtccctcagacag gccactgagcagagcgccagtggggtagcatcgtctgaaaactacgaacagaccccagat cagggtcaggatgcagatacgcccccccatgacagttctgcagctctttctggcttcatg gaggattcacgtgacgacgaaaccaccttagttgccgaagacacgtcagtcttctccatg tctgctggtactgagagcagcccagagctcatcggagaccagtctgagtccccggaagaa tccaaaggagcctcctcagatgagatggtggccagtagtgattcagaggtggcccacagc agctggaccctcctggaagctttgaatcaagatggaggccaagagtggccgtccaacctg caggactttagccagctgcagtcctgggaggcgacgagcatggagcaggaaacctccaca gttcaagtagagtcctcctctgtcattatcagagagacggttcaagttcacgtgactcag cagagttcttccaccacagagggcattatatcctctggtcaggtctttgctcaggcttta gcagaggagcttcagaagaggtacggtgagattctggctgagcttcaggggctcagagag gcagctgcagagtcacaggagaacatcaagagcttggaagaagagacacagtatctcact gctgccaaagaagaagcagaatcccagtccaatcgttttgaagaggaacttcaatccacc agagaggagatggaaaagctctctcagaacagcagctctggggtggagaaatatggtgtt gaaatgcagcttctagaagaacagatagacattttgagcagtggaagtaaaactaaggaa gagaggatccaggccctgcaggcagatctggaaacagctcaacaagctttctcagagcag gaggggcatgtcaggatgctcagtgctcagctggaggacagggagcttctctcctctgag ctccaaaggagactccaagagatcgaaaacagcatgttggaatcctctcagacatcagag ctcaacaatgacactctatcaaagaaggacacggagatcagcgagctgcaactccttctc ggacaaaaggagcaagaagcgacggagctcaatgacagtatgtcagcaaaactcctccaa gcagaggaagagaagttccagagaaatggtgaagtcaaatcgctgaaggagcagatagta gactttgagaaggtcagagacgagaaacagaaagagacttctgaagactcaggcgctcag gtagatgatgaactcactagtgtgcgaaaggagaaaggagtgctggagacccaactgatg accaccaagaagaagttgcaggctgcacttgtgcaacgcaaagagctcatgaagaaggtt gctgatttcgatgtagaagtgaagacattgaaagagcgagaggttgaaactcctgcagac atcccagaggcagagcaatccagagggcaggagatccaggaaatggaggccaaactcctc gaactccaacaaactttgagaaccaaagaagaggcggtcgaggccctcgatctgaagatg actcaacaggatcaagttctcactgaaacactggctgtgaataaaaagctaattgaagaa gctgaaaactctcagcaggctgacggtccccctgaaataactgcgttacagtcccaactg gcctctcttgaagcagagtgcgaaacccttcagaagaaagttcaggaggctcaagaatct cgcaaggaaaccatccgcaaagccaaagagaaagacaggcaccaccgggaacagctgaag cagcagaaagaagaatacagcgagctcgtagaacgatctgaggagcagagcgcggagaga gaagtgcttctgactaagttgagagaattagaagaacaaataagcactgaacctcccaaa gaggccaagcaactggctgaacacatggaaaagcaagcaacaagtgattgggtccaggag gaatgggtggattttgccacgtcagagacagattcatcacagccacaagcaagtcatccg gtccagcaacctgcagagcagtcgctcttttctgaacaaatagatgagtctttgcaagcc ctcagagcagaaatccagagcgtgcggatggctaacgcagagctagagaagcagctgctg gaaacccacaccagtttgtcaatgaaggaggctgaattattggagctgggcgaagagctg caggcactacgagaaaaggaaagacagattgatgcactctcagaggaagtgaatgacctc agagaaaagtttcaccaagctgaggcttacgctgaaaccctgaaagcagagatggaaatt gcagcaaaagcaacctctgaagattctaccacctccatcacaactcttcaggccgaggtg gaggacttcaaggagttcctcgacaataagaaccttgagatcatggagctaggtcagcag cttagcgagcagaagtctctcatacactccatgcaggacacggtgtctcagaaggatcag ctgatagtttctttgcaggaagaactgaatgctgagcaagaaaaatcccaaaggttagag gtcgaggttccacagaagcaagaggaaggaaaagacagcgaggcaaaggtccagcagctc caaaggaaacttcaggctgctttgatttctcgcaaagaggtcttaaaagaaaacaaaacc aaaaaggaacagctggctgaaactgagaagctcattaaaaagctgaagcacaaaatggag tccgctgaaaatgagctggagaagctgagagcggaaagagtcagactgattgatgaagtt gaccggacattagtggaaaaccaaagcttaggatcgacctgtgagagcctcaagctggcc atggagggcgtagtgagtgagaaagacgcctgtaagagggaagtggagctggccaaagaa gaggccgccaaagcctgcagagaatgggaggagaaggttcaaggcatgaaggacgagtac gagactctgctcaagtcgtacgaaaacgtgagcgacgaggccgagcgagtgaggcgagtc ctggaagccgcccggcaggagaggaaggacctcgcgaccaaggtgagggcccacgaggcc gggaggcaggaagctgagaggcaaggagaagaggcacagaaagaggtggatttggtgaaa gacaaaatgagaaagtttgccaaaggaaagcagcagaaaataatggagttggaggaagag aatgagagactcagagagatgcaggacaagaccgtggtaaagcgagagggaaggactctc aaagcagaggctgaaagacttcaggatgagctgggggctttgaaagctgacttggattct actgtggcagaaagagactcgttagggcagcagattgaggaactgaaggaacagcttgcc caaacaggaccgacagaggacactataactaatgcagctgttgaagaagaggtagtcact gcccagcaatcagatataaccatgaccacagcagagcctgttgagagtcagaatgaagac aaagaaacacaagctgaacaaatagctgcagcgcctgcaccagaaacacactctgaggaa aaatcagaaatgactgaaagtgttttattagaggagaaaatgagggagatggaagcagct gtcaattcagagaggaaactgtggcaggaacaggaagctcgactcaaagcggagctgggc tctcttgagcgagatctccaggagagtaaagagaaggggagcctggtggcctctctggag aagtgcctccaagagggcaaagagagagaaaggagcctggtggaggagggtgccaagagg gaggcgcagttcaaagagctgctcaggagcctggaagccgagaaggacaacctggaggag cgtctgatgaaccagctggcccagctcaacggcagcatcgcagactaccagcaggaggcg gcggacaaccgggagcatttgaccgagctgcagcgggaggtggagcggttggcgagggag cgggccgagttggaggccgaggcgcagagcgagagcgaccgggccgccaggctggaggag gacatgaggcaagcacagagagagagagccgaagcagaagcagagtctggtaagcagagg gagctggagcagcagctgaggtccgctcagagggtcagggaaggcagccagagcagagcg cggcagctggaggagctgctgagggagaagcagctggaggtccggcagctgcagagggac tgcatcaagtaccaggagaggatcagcgagatgggtagagacgctaaggcgctgcagcaa ggttacaacgagctccagaataagctggaacaatcccaactggagacttcgaaaacttta gaantgcttaagtccgggggtccggggactcacggtgtgcaaggttatggaggtgcccat agtggaggtccattgcctctaaatagggtcagggaaggcagtcagagcagagcgcggcag ctggaggagctgctgagggagaagcagctggaggtccggcagctgcagagggactgcatc aagtaccaggagaggatcagcgagatgggtagagacgctaaggcgctgcagcaaggttac aacgagctccagaataagttagaacaatcccaactggagacttcgacaactctagaagac ctgaaaaggacagaagcagagtgtgatagctgtaaatctcagctggatgagtcccggaag caggcaagcgtagctatcgtggagaggagtaccatggagcagaacgcccaacacagagag gcctcgatgaaggcagaggcggagcagaccctggactctgtgaggttcagactcggaggc gaactgaaggagatggagctgagactggacgaggtggacagagagcgggacaaggaagag gaagcgaccctcgaggccagagaggtcgcaagagcagccgagagacgagcccaggagctg caagcccgtctggacgagtctctggccaggttagctgccttctcgcgctgcatgtcctca ctgcaggacgaccgagacagagttttggacgagaccaaacaatgggagactcgcttcagt gactctctgcagggtaaggaggccgaggtgcgggaagctgagacacgagcaaaggatctg gcagaacagctccagagagaatctgctctgaagctgcaacttcagctatcagttgacagg ctggagaaggcagagaaagatttgaagctgaaactggaaggggaggaaaagaaagtgtca gagagccaagccgccctagaggaggtgaaaaacaagctgcagcaaaccacctccgagctg caggctgcacaaagtgaagctcacgctctgacaagagaggccgagagtctcaaccagagg gccagagctctggaggaggctgtcgggcggctgcagggtgaagtggaccaagccaggaca gagctgagtgagcgggaggccgaagagaggcggctgtgtctgaacgtggagcaactagag acagacctgcgctcctctaaagccctgacagagagtctgcagactgagttaaatgagaag gaaaggagagaagtggaaatgctgggagagaaggagcatgctgttgctcaggctgcagag gaggctagaaaggaggccgacagcagggcaaaggaagccgaggaggagctggagcagagg agaggggagctgagggatctggaagaaaaactgcgaaaggctgaagaggagagcaacaac agaaaaaccaaactggactctttcatgaaggccatgggctccctgcaggatgacagagac cgagtgctcaacatgtacaaacagctggaggagaaacacctgcaggtgatgctggagaag gacggtctgatccaagaggcggcaggggagaacaacagcctgaaagaagagctgcgctct ctgctggtccagagagacgacctgtatgctgaaaggtctcagctgtccgctcagctccac ggctaccgcgatgaactgaaccaagtcctgagcatgaaggactcgcagcacaagcagctt ctggcggctcagagagcgcgcattgcggaattagaaagtcaggtaaagagtgtaatcaga gccggagagacgggagcggaagcagtgaaagtggaaagggagtctctaagccaggctgca ccacaggtgatagatgctcccggtgcagaggtggagaagctaagggagcagctgcaagca gccagagagcaagtggaggctttggaggagagattacagacggagagacaggagcagcag ggcaggagcaaagagctgtcagagctgcgatgggaggggggggtgatgcggacagagtca gagaacgctcaggagagggtggcggagctggccagagacctgctggctgtggaacagagt ctgctggcagagagagagatgaccacgcagctgagagcagagaaccagtccttctcaaaa gccatggcctccctgcaggacagcagggaccaggctctgaacaaggcccaggaactgagc ctgagactggaggagatgagtaaagcagggggcgtcccagtacccagcagccccgggggc tccactggagaagtgtggggtctgaagaatgcactacaagccctgcagaatgacagggag agactgctggagcagcttcaaacacaggcgactgagctcaagaagctgaagtcagagctg gctcgacttggagccggagaactaattaaagtcagccaggagctgtatgaagagaggaag aggaatgaagacatgctcagtatcatcatgcagctggagaatgtggcggaaatgggcaaa cagcagatagaaactctcagactggagcgtatggactggatggctcaggcggagcagctg aagcagcagaccctcaccactctttcagagagagaccaacaactgcggcaactcagcgcc atgctggaggaggcccgcactcagaagcccaagctccagcaggaacactatcagagagag ggaacagaggaagtggacagcgctcctggagccccacaggagcgtagcagcctgtcagac agccatgcatacatagccgaggtcaaagagctgcagggaaggctagatcaagagatgcag cagagagtggccgctgaggagcagctgatggccacacaggatcaactcaaacgtcacagc cagggtacatggcactcggcacaggaggaggatcactcggagacggctgtttttatcgag caggaaggagccgtcactcgagctcggagaggcggccccagcttgatgcggatgctgcgg ggggctttctgctcccgccagcgcacccctctgctgctcagcctctatctgctcactgtg cacatcctgctgctgctgtgtctgggcgggctcctctga

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