Notothenia coriiceps (black rockcod): 104950205
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Entry
104950205 CDS
T04920
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03013
Nucleocytoplasmic transport
ncc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104950205 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104950205 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncc03016
]
104950205 (tnpo3)
Transfer RNA biogenesis [BR:
ncc03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
104950205 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
104950205
NCBI-ProteinID:
XP_010774993
UniProt:
A0A6I9NIN9
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MASWKGCVHTLIEKYNNDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSS
TVVTLLTSCVEKAGTEEKMLIKVFRCLGSWFNLGVLDSNFMAGNQLLMVLFQVLQRDETS
TNLHEAASDCVCSALYAIENVDTNMGLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRI
FTELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKIND
AALHTIFRPYIQRLLHCLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSME
CFSQLYSTLKEGNPSWEVTEAVLFIMAAIAKSVDPENNPTLAEVLQQVVLLPETVHIAVR
FTSIELVGEMSEVVDRNPRFLDPVLNYLMKGLREQPLASAAAKSIHNICSVCRDHMAQHF
QGLLDIARALDTFALSTEAAVGLLKGA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctggaagggatgtgttcacacactcatagaaaagtacaacaatgacatcagc
tcgatgcccttcctcatagagatcctcaccgttctgccggaagaggtccacagccgctct
ctgaggatcggagccaaccggaggacggaaatcatcgaagacctggcgtactactccagc
accgtggtcacgctgctgacttcctgtgtggagaaggcgggcacggaggagaagatgctg
attaaagtgtttcgctgtctggggagctggttcaacctgggagtcctggacagcaatttc
atggccgggaatcagctgctcatggtcctcttccaagtcctgcagagggatgaaacctcc
acaaacctccacgaggcggcgtctgactgcgtctgctcggcgctgtacgccatcgagaac
gtggacaccaacatgggtctggccctgcagctcttccagggcgtcctgacgctggagacg
gcgtaccacatggcggtggctcgggaagacctggacaaagtcctgaactactgccggatc
ttcaccgagctctgcgagaccttcctggagaccacagtccggagtccgggccaggggatg
ggagacctgcggaccctggagctgctgctgatctgtgcaggacacccgcaatacgaggtg
gtggagatctcctttaacttctggtaccgactcggagaacatctgtataaaataaacgat
gccgctcttcacaccatcttcagaccatacatccagagacttctgcactgtttggcccga
cactgtcagctggacccagaccacgaggggatcccggaggatacggatgattttggagag
ttcaggatgagagtctctgacctcgtcaaagacgtcatttttctggttggatccatggag
tgtttctctcagttgtattcgacgttgaaagaaggaaacccgtcctgggaggtgacagag
gccgttctgttcatcatggctgcgattgctaagagcgttgatccagaaaacaaccccaca
ctcgctgaggttttgcagcaggtggtcttacttcctgagacggtacacatagcagtccga
ttcacgagcattgagctggtgggagagatgagcgaagtggtcgacagaaaccccaggttc
ctcgaccccgtcctgaactacctgatgaaaggactcagggaacagcctctggcgtcggcg
gcggcgaagtcgatccacaacatctgctcggtgtgcagagaccacatggcccaacacttc
cagggactgctggacatcgcccgggcccttgacaccttcgccctatccaccgaggctgcc
gtaggactgctcaaaggtgcgtga
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