Notothenia coriiceps (black rockcod): 104950328 Help Entry 104950328         CDS       T04920                                  Symbol xrcc1 Name (RefSeq) DNA repair protein XRCC1   KO K10803   DNA-repair protein XRCC1 Organism ncc  Notothenia coriiceps (black rockcod) Pathway ncc03410   Base excision repair Brite KEGG Orthology (KO) [BR:ncc00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     104950328 (xrcc1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ncc03400]     104950328 (xrcc1) DNA repair and recombination proteins [BR:ncc03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Short Patch-BER factors      104950328 (xrcc1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRCC1_N BRCT NACHT BRCT_2 PTCB-BRCT LIG3_BRCT SLC12 Motif Other DBs NCBI-GeneID:  104950328 NCBI-ProteinID:  XP_010775130 UniProt:  A0A6I9NKR1 LinkDB All DBs Position Unknown AA seq 954 aa AA seqDB search MNSAQHLLRSQRDLLLSLTLDHPAPLLRWLRDAEVLSPAHYLSLLERSPSNAVAQAMEMV CATEESSQRFLQVLREVQDYYCRDLQLWVERHCREGVSKPAPEPLKVEEKKPKGFSKLFK GKSKGFTLTTEAKAKEQLEPSRSLKLANLRVPISAHKTTLLKRTAQLKCYSEGEGVASNS ASHIEIRYTDLFVTEDDDFVDSSTHEYFDLASRRARIYVHQACQRIRPCHLLDPQGTSGR PPKRVKVKGIAGIGKSVAVQRLVYEWAIGKNMREFTCIFDLRFRELNLIEAPLSLFELLG ERFRYLKEALPDLFTSPSSLLFILDGLDEFKFTLDWNSPDKNIDFRSKVPVSELMVALIK GSLLPEASVILQLEKEEEVHSIDIGNEGSAFIEVLVGNSSAVRDQDYEVLLVTSSFMSPT ESRNGTNMNRVRFFGPQQLQKSATQEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKND PLPTTSPKLTKLGQFRVKEEPPSSAPSLQPGSLFFNRDHATKSTTSPKVSPQSERLSYAA AALQAGGSHSSGAGPPSSGPAPSSSSASPQPPAKRTFEFSKEQKPSSGPPPSKKSSPAVS PEGKAAAPKPKPSPAGTPSSSTPKASPVQKSADKNRESHSKPEPKPKQPKASAQQVPFKR LLEGVVFVLSGFQNPMRGDLREKAVDMGAKYRPDWTPDSTHLICAFANTPKYSQVKSAGG IIVRKEWVLDCHKKKQKITYKQYLMDGAESSSESEMEVDEQSEEEVRTKTPPKQQRQVTP KKTPEKKKDEDEYAGSTDVDEPGSGDDESAVDTEDELQRVEHESRKKKASSDKKVKQEDP YGGSTDENTDAEAEEDLPIPELPDFLRGKHFFLYGKFPNNERRLLLRYIVAFNGLIEDYM TEKVQFVVTSEGWHDSFEDALMENGNLNFVKPAWIYAINERQKILPYQPYSVVP NT seq 2865 nt NT seq  +upstreamnt  +downstreamnt atgaactcagctcagcacctgctccggtctcagagggacttgctgctgagcttgactctg gatcaccctgctcccttgctgcgttggctgcgtgatgctgaggtgctttctcctgctcac tacctgtccctgctggagaggtccccatccaatgctgtggcccaggccatggagatggtg tgtgccactgaggagagcagccaaaggttcctgcaggtgctgagggaggtgcaggactat tactgcagagatctccagctctgggtggagagacactgcagggaaggtgtcagtaagcca gcgcctgaacctttgaaagttgaagaaaagaagcctaaaggtttttctaaactgttcaaa ggaaagagcaaaggatttaccctgactactgaagcaaaagcaaaagaacaactggaacct agcaggagtttaaagctggccaacctccgagttcctatttctgcgcataaaacaaccctg ctgaaacgcacagcgcagttgaagtgttactcagagggagagggagtggcttcaaactca gcttctcacatcgagatccgctacactgaccttttcgtgacagaagatgatgactttgta gacagcagcacacatgagtactttgacctagcgagcagacgggctcgcatctatgttcat caggcttgccagcgtatacgaccatgccatttattggacccccaaggaacatcaggacgg ccccctaaaagggttaaagtgaagggtattgctggaatcggaaagagcgtagcagtacag agactcgtctatgagtgggcgatcgggaagaacatgcgtgaattcacctgcatttttgac ctacgcttcagagagctcaatctgattgaagctccactgagcttatttgagctgcttgga gaacggttccggtacctaaaggaagcactacctgatctcttcacttcaccaagctctttg ctcttcatcttggatggattagatgagttcaaattcaccttggactggaacagtcctgac aaaaacattgactttcgctcaaaggtgccagtgtcagagctgatggtggctttaatcaag ggaagccttctcccagaggcatcagtcattcttcagttagagaaggaggaggaggtgcac agcattgatattggaaatgaaggctctgctttcatcgaggtgctggtggggaattcttca gctgtcagagatcaggactatgaggttctcttggttacgtcttccttcatgtcgcccacg gagagtcgtaacggcaccaacatgaaccgagtgcgtttcttcgggcctcagcagctgcag aagagcgcgactcaggagaagtgggacagagtgaaaattgtgtgcagccagccgtacagc aagaacatagcatacggactggcctttgtgaagtttcattcaccgcctgacaaaaatgat cctcttccaacaacctccccgaaactgacaaagctgggacagttcagggtgaaggaggag cctccatcctccgctcccagccttcaacctggcagtctcttcttcaatcgggaccatgca acaaagtccactacctcaccgaaagtgtctcctcagagtgagaggttgagttacgctgct gctgcgctgcaggctggcggctcccactcctcaggtgccggccccccctcctcaggcccg gctccctcctccagctcggcctcaccgcagcctccagcaaagagaacatttgagttcagc aaagagcaaaagccttcctccggccctcccccgtcaaagaaatccagcccagctgtctca cctgaggggaaagctgcggcccccaaacccaagccgagccccgccggcacgcccagctcc agcaccccgaaagcgtccccggtgcaaaagtctgctgataagaatcgggagagccactct aaacccgagcctaaacccaaacaaccgaaagccagcgcgcagcaggtccctttcaaacgc ctcctggagggggtcgtgtttgtcctcagcggcttccaaaaccccatgagaggggatttg agggaaaaggctgtggacatgggagccaaatacagacctgactggacccccgactccaca cacctcatctgtgccttcgctaacacccccaagtacagccaggtgaaatcagcagggggc atcatcgtgcggaaggaatgggttttggactgccataagaaaaaacagaagatcacctat aaacagtatctgatggatggagcagagtcaagctcagagagcgaaatggaagtggatgaa cagagtgaagaggaagtgaggacaaagactccaccaaagcagcagagacaagtgaccccg aaaaagacgccagagaagaagaaagacgaggatgagtatgctggctcaactgatgtggat gaaccaggaagtggagatgatgagtctgccgtggacactgaggacgagctgcagagggtg gagcacgagagcagaaagaagaaagcttcatcagacaagaaggtgaagcaggaggatcca tacggggggtccacagatgaaaacacagacgctgaggctgaagaggatctccccatccct gagctcccagacttcctgagaggaaagcacttcttcctctatggtaaatttcccaacaac gagaggcgccttctgctgagatacattgttgccttcaacgggctgatcgaggactacatg acggagaaggtgcagtttgtggtgaccagtgaagggtggcacgactcctttgaagacgcg ctgatggagaacggcaatctgaactttgtcaaacccgcatggatttacgcaatcaatgaa cgacaaaagattctgccctatcagccctactccgttgtcccctga

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