Notothenia coriiceps (black rockcod): 104950335
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Entry
104950335 CDS
T04920
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00260
Glycine, serine and threonine metabolism
ncc00630
Glyoxylate and dicarboxylate metabolism
ncc00670
One carbon pool by folate
ncc01100
Metabolic pathways
ncc01200
Carbon metabolism
ncc01230
Biosynthesis of amino acids
ncc01240
Biosynthesis of cofactors
Module
ncc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
104950335 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
104950335 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104950335 (shmt2)
Enzymes [BR:
ncc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
104950335 (shmt2)
BRITE hierarchy
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Ortholog
Paralog
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
104950335
NCBI-ProteinID:
XP_010775142
UniProt:
A0A6I9NF20
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All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MLSFALRQLTRPLCQRAPVRLCVRGQQSHAATYSVDEERPWTGQESLAQDDPEMWDLLLK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKR
ALEAFDLDPALWGVNVQPYSGSPANFAVYTAVLKPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNTATGLIDYDQLEMTAKLFRPKLIIAGTSAYARLIDYARIKKLCT
DIKAYMLADMAHISGLVAAKAIPSPFDHADLVTSTTHKSLRGARAGLIFYRKGVRSVDKK
GKEIVYDLEDRVNFSVFPSLQGGPHNHAIAGVAVALRQTMSPMFKEYIGQVIVNSKAMAT
ALLSKGYTLVSDGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALSPGG
LRLGTPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTGKLLDFKNFLLQDSETVARIA
NLRHRVEAFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgctctcagacaactcacacggcctctgtgccagcgagcccccgtccgt
ctctgtgtgcgtggccagcagtcccacgccgccacatactcagtggatgaagagcgtccg
tggacgggccaggagagcctggctcaggacgaccccgagatgtgggacctgctgctgaag
gagaaggaccggcagtgccgcggcctggagctcattgcatctgagaatttctgcagtcga
gcagctctggaagctcagggctcctgtctgaacaacaaatactctgagggctacccaggg
aaaagatactatggtggagcagaagtggtggaccagattgagctgctgtgtcagaaacga
gccttggaggcctttgacctggacccagctctgtggggggtcaacgtccagccgtactcc
ggctcccccgctaactttgctgtttacaccgccgtgctcaagccccacgaccgcatcatg
ggcctggacctgcccgacggaggacatctcacccatggctacatgtctgatgtgaagagg
atctcagccacctctatctattttgagtccatgccttacaagctaaacactgcaacagga
ctcatagactacgaccagctggagatgacggccaagctgttccggcccaagctcatcatc
gctggcaccagcgcctatgcccgcctcattgactacgcccgcatcaagaagctgtgtacc
gacattaaggcctacatgctggctgacatggcccacatcagcggcctggtggcagccaaa
gccatcccctctccgtttgaccacgctgacctggtcacatccaccacacacaaatccctc
cgcggggccagggctggcctcatcttctaccgtaagggcgttcgctcggtggacaagaag
gggaaggagatcgtgtacgaccttgaggacagggtcaacttctctgtgttcccctcgctg
cagggcggccctcataaccacgccatcgctggtgtggctgtggctctcagacagacaatg
tctcccatgttcaaggagtatatcggccaggttatagtgaactccaaggctatggctaca
gctctgctcagcaaaggctacaccctggtatcagatgggactgataaccaccttgtcctg
gttgatctgcggcctaagggcattgatggagcgcgggccgagcgcgtgctggagctggtg
tccatcacagccaataagaacacctgccccggggacaagagcgcgctgagtcctgggggc
ctcaggctgggtactccagccctgacatccagacagttcaaagaagctgactttgtgcaa
gttgttgagttcatggatgaaggcttcaagattgccttggacgtcaagaagaagacagga
aagctcctggacttcaagaactttcttctccaggactctgagaccgtggctcgcattgcc
aacctgcgccaccgcgttgaagcttttgccaggcccttccccatgccaggcttccacgac
cattag
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