Notothenia coriiceps (black rockcod): 104950412
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Entry
104950412 CDS
T04920
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104950412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104950412
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104950412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
ARM_ECM29
UBM
Motif
Other DBs
NCBI-GeneID:
104950412
NCBI-ProteinID:
XP_010775234
UniProt:
A0A6I9NBV7
LinkDB
All DBs
Position
Unknown
AA seq
2308 aa
AA seq
DB search
MENEVKVMEKSLKIIGEKVYEPLSVASPMVPGGIRNIHEGKVAGQMGNAANHHSDRHGPE
DYMNIVLANEEGDSAMRNPSFSLRSPQSDCSPAGSEGTPKPGSRPPLILQLPPPYASPRE
GGLDQKQLLQQRKKGPAVKEEKDMYDIVSSPNNDSTKLTLKLSRVKSNESDSAGDVLPGM
DENSDNMEAELGFQQVPVLQQNLGARLHHAGSASGLQPPSSPYDEAELDALAEIERIERE
AASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNAGKLTPQEAT
AAGNGASRPPLMVSIELQQAGRADGQLDPCPAAPIPALEAQRWPEEPASGPAAVEGSDTA
LRLKPDGRPEVIKNRVDKHDSRRDGRDSSKHRLDEKSSERRGDMPKSSHRGELGRDRDRE
SDRDRRHRSETGGRDRRSPDPRCRSDRDRYRASSTGEPGRSGNRQDGSNPASSASGAKLP
DAFPAQLLGGHSGALKNFQIPKINREKDGSGSIESPMWVQPKVKLERLGLVQDFEKRPKP
VVVLKKLSVDQIQRIIRHSKSGKNRSSSAKSVTGGMDPSVLRDLPPELLAEIESTMPLCE
RVKVNKRKRSTVNDKPKYAEVSSDDDFDANGESARKRQRQEKDRSWDTEERERRGSGEHR
KIVSRDSRRGSGSRYRDSSDEHSPPPSISEVARKMKIKEKQKKRKAYEPKLTHEELMDSS
TFKRFLNSIDNILENLEDVDFTAMAEADDDEIPQEFLLGKHQLNELGSESAKIKAMGISG
KIPTEKLVKLLNILEKNILDGSKLSTMMTHDNDAEDEEKLWRDLIMERVTKSADACLTAL
NIMTSAHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLLSSKAKRAKC
STHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAI
KLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPLYIQMVTALVL
QLIQCVVHLPNDKDFYDEYEGKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEEDY
RPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAA
RLRKDAVTSKMDQRSIDRILKESQGNDETQQLQKALLDYMEENAETDASLVFARKFYIAQ
WFRDTTTEAEKSMRNQNPKDEDSSDGPQHAKEIETTGEIMQRAEKRKKFLRNIIKATPAH
FATLKMNSDTVDYEDSCLIVRYLASMRPFAHSFDIYLTQILRVLGESAIAVRTKAMKCLS
EVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDMLTERI
LDTGISVRKRVIKILRDICLEQPTFSKITEMCVRMIRRVNDEEGIKKLVNETFQKLWFTP
TPANDKVSMTRKILNITDVVSACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACVQLVDN
LVEHILKYEESLSENKGVNSTRLVSCITTLYLFSKIRAQLMVKHAMTMQPYLTTKCNTAN
DFMVICNVAKILELVVPLMEHPSETYLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKV
THNYKFVWACFNRFYGALNKLKVQHHEDPNSTTLVANKPFLLRSLFTVGALARHFDFDLE
EFKGTNKVVIKEKVLELLVYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFMPEVKNLYNGI
LADRASSINLKIQILKNLQTYLQEEDTRMQYADRDWKKLSKQEDLKEMGDISSGMSSSIM
QLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPESSMRIKSD
QQLVEIDKKYTGFIHMKAVAGMKMSYILQQAIESSRRNIIRGFRQEETTSALCAHLFSMI
RGNRQHRRAFLISLLNLFDDSSRTEVNMLLFVADNLACFPYQSQEEPLFIMHHIRRRKRF
IEILPGNEEGKNEKEDVVRRPKKAQKPVPESESSESDLEDLDLEDVEKVMRLLPDNPTGL
LDFANSVQGILLLLVLKQHLKNQYGFSDGKIQKYSPTESAKVYDKAVNRKNTVVFHPRQT
IDFISNNMFRATLSNDVKRRIVRQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAISAL
LGGSGPMSGPSPRNQAGPETDDDYSDGDEKTPGSSRRSRRAVDSMNEIVESMDVIALCCP
KYKDRPQIARVIQKTSNGYHIHWMAGSYSGPWADAKKRDGRKQVPWVDTIKESDIIYKKI
ALTSNHKLSNKVVQTLRSLYAAREGGAS
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaggtgaaggtcatggagaaatcattgaaaatcattggtgaaaaagtgtat
gaacccttgtctgtggccagtcccatggttccaggtggcataagaaatatccatgagggc
aaagtagcggggcagatggggaacgcagccaaccaccactcagacagacatggccctgag
gactatatgaacattgtactggccaatgaggagggtgactcggccatgaggaatccttct
ttctctctgaggtctccacagtctgactgctccccagcagggagtgaagggacgccaaaa
ccaggttctcgtcctccactgattctacagttaccacctccctatgcctcaccaagagag
ggaggacttgaccagaaacagctgctccagcaaaggaagaaaggcccagcagtgaaagag
gagaaagatatgtacgacattgtaagctctccaaacaacgactcgacaaaacttaccctc
aagctgtccagggtcaagtcaaatgagtccgattcagcaggtgatgttctgccagggatg
gacgagaactctgacaatatggaggcagaactgggctttcagcaggtgcctgtgctccag
cagaatcttggagctcggttgcatcatgcaggtagtgccagtggtctccagcctcccagt
tctccgtacgacgaggcagagctggatgccctcgctgaaattgaaaggatagaacgagaa
gcggctagtgagaagtgttccaaggaggtgcaagataaagacaagccactgaagaagagg
aaacaggactcttttcccctggagccaggtgcggggggaccaggaggaccaacgggggcc
ccgggcagtggatcaacaggagggggcaatgctggcaaactgaccccacaagaggccact
gcagctgggaacggtgccagccgaccgcccctcatggtgagcatcgagctacagcaggca
ggccgagctgatgggcagctcgacccctgtccagctgcccctattccagccctagaggcc
caacgctggcctgaagaaccagctagtgggccggcagcagtggagggttctgacacggct
ttacggttgaaaccagatggaaggccggaagtaataaagaacagggtcgataaacacgac
agcaggagagatggtcgggattcatcaaaacacagactcgatgagaagtcctctgagaga
cggggagatatgccaaagtcatcacaccgaggggaactcggtcgagacagggacagagag
tctgacagagataggaggcatcggagcgagactggtggtcgtgaccgacgctcacctgac
cctcggtgccgaagtgaccgagataggtaccgagcttcttctactggagagcctggtcga
agcggcaacaggcaagatggttccaacccggcctcatccgcctctggtgctaaactgcca
gatgcattccctgctcagctactgggagggcatagtggcgctctgaagaacttccagatc
cctaagatcaaccgtgaaaaggatggcagtggctccattgaaagtccaatgtgggtacag
cccaaggttaaactggagaggcttggattggtgcaggactttgagaagaggcccaagcct
gtagtggttctgaaaaagctctccgtcgaccaaatccagaggatcatccgacacagcaag
tctgggaaaaacaggagctcctcagcaaaatctgtcacgggtggcatggatccatcagtt
ctcagggatcttcccccagagctgctggcagagatcgagtcaacgatgcccctgtgtgag
cgggtgaaggtgaacaagaggaaacgaagcactgtaaatgacaagcccaaatatgctgag
gtcagctcagatgacgactttgacgcaaatggagagtctgcaaggaagcgccagcgccaa
gaaaaagaccggtcctgggatacggaagaacgggagcgccggggttcgggcgaacatcgg
aaaattgtgtcgcgggacagccgacggggctcagggagccgctatcgagactcatctgac
gaacattcaccgccaccaagcataagtgaagtcgccagaaaaatgaagattaaggagaag
cagaagaaacggaaagcatacgaacccaagctgacccatgaagaattaatggactcgtcc
acattcaagaggttcttaaatagcattgacaacatactggagaatcttgaggatgtggat
ttcactgccatggcagaagcagatgatgatgagatacctcaagaatttctgctcgggaaa
caccagttgaatgagctgggcagcgagtccgccaagattaaagccatgggcatctccggc
aagatcccaacagaaaagctggtgaagctgctgaacatactggagaagaatatcctggat
gggtccaagctctccaccatgatgacccatgacaacgatgctgaagatgaggaaaaactc
tggcgggacctgataatggagagagtcacaaagtcagcagacgcgtgtctcacagctcta
aacatcatgacctcagcgcacatgcccaaagcggtctacatagaagacgtgatagagcgg
gtgctacaatacaccaagttccatctgcagaacacactgtacccccaatacgacccggtc
tacagggtggaccctcatggaggtggcctgttgagctccaaggcaaagcgggcaaagtgc
tccacacacaagcagcgagtgattgtcatgttgtacaacaaagtgtgcgacattgtcagc
aacatctctgagctcctcgaaatccagctgctcacagacaccaccatcctccaggtttct
tctatgggaatcactcctttctttgtggagaatgtcagtgagctgcagctgtgtgccatt
aaactcgttacagctgtgttctcacgatacgagaagcatcggcagctgatcttggaggaa
atctttacctctttggccagactgcccaccagcaaacgctccctcaggaacttccggctg
aacagctcagaccaggatggagagcctctgtacatccagatggtgactgctctggtgctg
cagctgattcagtgcgtggtccacctccccaacgacaaggatttctacgacgagtacgag
ggcaaggtggatcaagatgtgttgataaccaactcgtatgagacggcaatgagaacagca
caaaacttcctctccgtctttctcaaaaagtgtggcagtaagcagggagaagaagattac
cggcctttgtttgagaactttgtccaggacctgttatcgactgtaaacaaaccagagtgg
ccggctgcagagctgctgctcagtttgcttggcagactactggtacaccagttcagtaac
aagcagacagagatggctctgagagtagcgtctctggactacctgggcacagtggctgcc
cgcctgaggaaggacgcggtcaccagcaaaatggaccagagatcaattgatcgaatattg
aaagagtctcaaggtaatgatgagacccagcagctgcagaaggctctcctggactacatg
gaggaaaatgctgagactgatgcctcactggtgtttgctagaaagttctacattgcccag
tggttccgggacaccacgacagaggctgagaagtccatgaggaaccagaacccgaaggat
gaagactcatcggacggaccgcaacatgccaaggagatagaaacgaccggggaaattatg
caacgtgctgagaagcgcaagaagtttttgcgcaacatcatcaaggccacgccagctcac
tttgccacactgaaaatgaactctgacactgtggactatgaggactcctgtctgattgtg
cgttatttggcctccatgaggccgttcgcccatagctttgatatttatttaacacagatt
ctgcgagtccttggggaaagtgccatcgccgtaaggactaaagccatgaaatgtctgtcc
gaggttgtggctgtggaccccagcatactggcaaggtccgacatgcagcggggcgtccac
ggccgtttgatggacaactctaccagtgtgagagaggcagctgtggagctgctgggcaag
tttgtgctcagcagaccccaactcactgagcagtactatgacatgctcacagagaggata
ctggacactggtatcagcgtaagaaagcgagtgatcaagatcctcagagacatctgcctg
gagcagcccaccttcagtaagatcactgagatgtgtgtgaggatgatccgcagggtcaat
gacgaggaaggaatcaagaaattggtgaatgaaacattccagaagttgtggtttactccg
actcccgccaatgacaaagtatccatgaccagaaagatcctcaacatcactgatgtggtt
tcagcgtgtcgagacaccggctatgactggtttgaacagcttcttcagaatcttctaaag
tctgaagaggatgcatcgtataaaccagccaaaaaggcctgtgtgcagcttgttgacaat
ctagtggagcacatcctcaaatacgaggaatctctttcagagaacaaaggtgtaaactca
acacggctagtgtcgtgcatcaccaccttgtacttattcagcaagatcagggcccagctc
atggtcaaacatgccatgaccatgcaaccctacctgaccacaaagtgtaacactgccaat
gacttcatggtcatctgtaacgtggccaagatcttggagcttgtggttcctctgatggag
catcccagtgagacttaccttgccaccatcgaagaagacctcatgaagctcatcatcaaa
tatggcatgacggtggtccaacactgtgtgagctgtctcggagctgttgtcaacaaagtc
acgcacaactataagtttgtgtgggcttgcttcaacagattctatggtgcacttaacaag
ctgaaggtgcagcatcacgaggatcccaacagcaccacgctggtagcaaacaagcccttc
ctgctgcgatcgctcttcactgtgggggccctggctcggcactttgactttgatctggag
gagttcaaaggaaccaacaaagttgttatcaaggagaaagttcttgagctgctggtttac
ttcaccaaacatgaagacgaggaggtcaagaccaaagccatcatcggcttaggcttcctt
gtgatcatgcatcccagccagatgtttatgcctgaggtgaagaatttgtacaacggcatc
ctggctgacagggcctcctccatcaacctcaaaatccagatccttaaaaacctccagaca
tatcttcaggaggaagacacgcggatgcagtacgcagacagagattggaagaaactgtcc
aaacaggaggatctgaaggagatgggagacatctcatcagggatgagcagctccatcatg
cagctttatctgaaacaggtgttggaggcgttcttccacacgcagtccagtgtacggcac
tttgctctcaacgtcatcgctctcacactcaaccagggtctcatccatcctgtacagtgt
gtaccctacctcattgcaatgggaacagacccagagagcagcatgaggatcaaatctgac
cagcagctggtggagattgacaagaagtacacgggattcatccatatgaaggcagttgct
gggatgaagatgtcgtacatcttgcagcaggccatcgaatcgtctcgcaggaacatcatc
agaggattcagacaggaggagacgacctccgctctctgcgcccacctcttctctatgatc
cgggggaaccggcagcaccggagggctttcctcatctcgctgctgaacctcttcgatgac
agttctaggacggaagtgaacatgctgctgtttgtagcagacaacctggcctgtttccca
taccagagccaggaggagcctctcttcattatgcaccacataaggaggaggaaaagattc
attgagattctcccaggcaatgaggaaggaaaaaatgaaaaggaagatgtggtacggcgg
cctaaaaaggcccaaaaacctgttccagagtcggagagctcagagtccgatctggaggat
ttggatttggaggatgtggaaaaagtgatgaggctcctcccagacaatcccacaggtctc
ttggactttgctaactctgttcagggcatcttgttgcttctggtgctcaaacagcatctg
aagaaccaatatggattctctgatggcaaaattcagaagtactctccaacagagtcagcc
aaggtgtacgataaggcggtgaacaggaaaaacactgttgtcttccacccgcgacaaacc
atcgacttcatctccaacaacatgtttcgtgccacactgtcaaacgatgtcaagaggcga
attgtccgacagtacctagatttcaaggttctgatggaacatctggacccagacgaggag
gatgaggagggagaagcgtctgccagcgctaacatcagaaacaaagccataagcgccctc
ctgggaggctccggccccatgtcgggacccagccctcgcaaccaggctggaccagagact
gatgacgactacagtgatggcgacgaaaagaccccagggtcctctcgaaggtcaaggcga
gcagttgactccatgaacgagatagtggagtccatggatgtgattgctctttgctgtccg
aaatacaaggaccggccgcaaatagctcgagtcatccagaagacctccaatggataccac
atccactggatggccggctcctactcggggccctgggcagacgccaagaaacgcgatggc
cgcaaacaggtgccttgggtggacactattaaggagtcggacatcatttacaagaagatt
gccttgaccagcaaccacaaactgagcaacaaagtagtacagactttacgctcactgtat
gcagcgcgggaaggaggggctagctaa
DBGET
integrated database retrieval system
