Notothenia coriiceps (black rockcod): 104950553
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Entry
104950553 CDS
T04920
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
104950553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104950553
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104950553
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104950553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
U-box
DUF6301
HisKA
zf-rbx1
Exonuc_VII_L
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
104950553
NCBI-ProteinID:
XP_010775395
UniProt:
A0A6I9NLE5
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MSAKLWTEEQFNCPVCLDLPNDPVTIPCGHSYCMACIKDYWSKNDPKGVYSCPQCRKSFS
PKPSLSKNTMLAEAVEQLRKGAHIADVRASMRSGTGVASSKTKRKLSSSAVLCDMCKGEQ
RAAVKSCLVCMSSFCEAHLKPHKTKKSLSKHELIAPTSNLAEKICAEHKYLQEFFCRQCK
MFVCWLCTSNQHKGHECVSTKVERLEKQKLMSEMQTENTQRLKEREQELKDMKKMMEVTK
RSSDMVHEDTEQVLSELQRSVERLQELLEEVLDQASMQKMGQAQEVTDTLEAEVKELRTR
DKEMKDLLRCEDNIYYLE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaaactgtggacagaggagcagtttaactgtcctgtgtgtctggacctccca
aatgatccagtaaccatcccttgtgggcacagctactgcatggcctgcatcaaggactac
tggagcaagaacgatcccaagggcgtctacagctgcccacaatgccgaaagtccttcagt
cccaagccctccttgtcgaaaaacaccatgctggctgaggctgtagagcagctccgcaaa
ggggcccatatagctgatgttcgtgcctctatgcgaagcggaactggcgttgcctcatcc
aaaaccaaaaggaaactctcttcctctgcagtgttatgcgacatgtgcaaaggagaacag
cgagcagcggtcaagagctgcctggtgtgcatgagttcattctgcgaagcccacctgaag
ccccacaagaccaagaagtccctgagtaagcacgagctgatagcacccacaagcaacctg
gctgagaagatctgcgcagagcacaaatacctgcaagagttcttctgtcgccagtgtaaa
atgttcgtctgctggctgtgcaccagcaaccagcacaaaggccacgagtgtgtgtccacc
aaggttgagcgtttggagaagcagaaattgatgtcagagatgcagacagagaatacgcag
agactgaaggagagagagcaggagctgaaagacatgaagaagatgatggaggtgacgaag
cgttcttcagacatggtccatgaggacactgaacaggtgctgtcggagctgcagcgttca
gtggagcgtctgcaggagcttcttgaagaagttctggatcaagccagcatgcagaagatg
ggccaagctcaggaagtcactgacactttggaggcggaggtcaaagagctcaggacgaga
gacaaggagatgaaggacttgttacgctgtgaggacaacatctactacctagag
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