Notothenia coriiceps (black rockcod): 104950676
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Entry
104950676 CDS
T04920
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104950676 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncc03009
]
104950676 (wdr43)
Ribosome biogenesis [BR:
ncc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104950676 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
WD40_2
Tricorn_2nd
Beta-prop_Nup120_160
Beta-prop_RIG_1st
PEP5_VPS11_N
NBCH_WD40
Beta-prop_IP5PC_F
BBS2_GAE
AHSA1
Motif
Other DBs
NCBI-GeneID:
104950676
NCBI-ProteinID:
XP_010775528
UniProt:
A0A6I9NKC2
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MAADVGSSSLQLPCVFSPKSRQYLALCAQDGRLRIWNTDSKTLHQEYVPSAHLSATCICI
AWGPCRTVKEGPQRKKRKSEAVQEEKADLLAMGTAAGSVLIYSTAKGALHCTLDGGHSGG
VNCVQWHPEDGLLYSGSDDTNIVEWDLQTGKARSKWKADRAAVTSLSVSPDGKLLLSAGQ
IIKMWDLDTKEIYRKFTGHSSAVTTLRFATTRPPDSNGLYFLSGAAHERLLSVWQVRQDG
KDKNSVVSFTLTDEPQHIDLVQSNNKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPSC
SVQMSDTKDSPVPIPLLAAALTADKLSVQLAYGNHLQPVMERVEINTAERHICLTRDVQT
SLSLTMETSVSKVKTPIVNNKSKVLVPGLPGHQAPVKGTSEKRKKDTDTKELPDLVTQLG
VLYHMIESRVKMFHKLTKLHGKLYLLMTQVATSDSSNTVTEVDHTAKLVYEEGECFCCVP
CSLHS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgatgtaggtagctcttcgctgcagttaccctgcgtattttcacctaaatca
cgacaatacttagcgttgtgtgcccaggatggcaggcttcgcatttggaacacagatagc
aaaacacttcaccaagaatacgtgccttcagcccatttgagtgccacctgtatctgcata
gcctggggaccatgccggacagtcaaggagggacctcagaggaagaagaggaaatcggag
gcagtgcaggaggagaaggcggatctgttggctatgggcacagcagcaggcagtgttctt
atctacagtacagcaaagggagcactgcactgtacactggatggaggccacagtggggga
gtgaactgtgtccagtggcaccctgaagacggtttattatacagcggctcagatgatact
aacattgtagagtgggacctgcagacgggcaaggcaagaagcaagtggaaggcggaccgt
gcagcagtgaccagtttgagcgtgagccctgatggaaaactgctactgtcagcaggtcag
atcatcaagatgtgggacttggacaccaaggagatctacaggaagttcacaggccactcc
tctgcggtgacgaccctacgttttgccaccacacgacctccagacagcaacggtctctac
ttcctatccggtgctgcacacgaacggctgctcagtgtttggcaagtacggcaagatgga
aaggacaagaactcagtggtttccttcacactgacggacgagccgcaacacatcgacctc
gtccagtccaacaacaaggaagaggcggtgaggctggcagtggtgtgtaaggatgggcag
ctgcatctgtttgagcactttttaaatggtccctgtaagaagccgctgtcgccctcgtgt
tcagttcagatgtctgacacaaaggactcacctgtgccaatcccactgctggctgccgcc
ctgaccgccgacaaactgtccgtgcagctggcctacgggaaccacctgcagccggtgatg
gagagagtggagatcaacaccgcagagagacacatctgtttgacccgggatgttcagacc
agcttgtcccttaccatggagaccagcgtatccaaggtgaagacccctattgtcaacaac
aagagcaaagtgctggtgccagggctccctggccaccaggccccagtcaaaggaacatca
gagaagaggaaaaaagacacagacaccaaagagctgccagacctggttacccagcttgga
gtgctttatcacatgatcgagagcagagtgaagatgttccacaagctgacaaagctgcac
gggaaactctatctcctcatgacacaggtggcgacaagtgacagcagcaacacagtgaca
gaggttgaccacacagctaagctggtgtatgaagaaggtgagtgtttctgttgtgtccct
tgttctcttcactcttga
DBGET
integrated database retrieval system