Notothenia coriiceps (black rockcod): 104950680
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Entry
104950680 CDS
T04920
Name
(RefSeq) melanopsin-B-like isoform X1
KO
K04255
r-opsin
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ncc04030
]
104950680
G protein-coupled receptors [BR:
ncc04030
]
Rhodopsin family
Vision
Opsin
104950680
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7tm_4
CIS_tube
Motif
Other DBs
NCBI-GeneID:
104950680
NCBI-ProteinID:
XP_010775534
UniProt:
A0A6I9NCR7
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MDLDPGFYRPVHVQAHAHYIVAFFVLVIGTLGVTGNALVMYAFLCNKKLRTPPNFFIMNL
AVSDFLMAITQSPIFFVNSLYKGWIFGETGCKIYAFCGALFGITSMINLLAISLDRYIVI
TKPLQAIRWTSKRRTCLIIALVWLYSLAWSLAPLLGWSSYIPEGLMTSCTWDYVTSTPAN
KSYTLMLCCFVFFIPLGIISYCYLCMFLAIRSASRDIEKLGYQVRKSTLIHQQSIKTEWK
LAKIASVVIIVFVLSWSPYACVTLIAWAGYASLLTPYSKAVPAVIAKASAIYNPFIYAII
HSKYRDTMAEHVPCLHFLGQPPRKKCISVSHSESSLRDLMLSRQSSGSKTRFHRVSSMST
VDTQVWSDVELDPIDEGYSRKSSYSLGALRDKDPKSLANHSKGKGSHSQEQIHIPKRVSS
NRCDHTLSLESVNTIMHLAIGRRMEENPERLNKDKNQEAEQDKDNGQEQTQQDQKENDEK
ELEVLLQADSLDNIASVHSQAVIRLDLKKRPSRPWLL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggacctggatcccggattctatcggccggtgcatgtccaggctcatgctcattatatc
gttgccttctttgtcttggtgattggaacattgggcgttacaggaaacgccttggtcatg
tacgccttcctctgtaacaaaaagttacggactcctcccaactttttcatcatgaacctg
gcagtcagtgacttcctcatggccatcacgcagtcacccatcttctttgtgaactccctc
tacaagggctggatttttggtgaaacaggctgtaagatttacgccttctgtggagctttg
tttggaataacttccatgataaacctcctggccatctctcttgatcgctacattgtgatc
accaagcctctgcaggccattcgctggacctcaaagagacgcacctgcctcattatcgcc
ctggtctggctgtactctctggcctggagcctcgcaccccttttagggtggagttcgtac
atacccgagggcctgatgacctcatgcacatgggactatgtgacatctactcctgccaat
aaaagctatactttgatgctatgctgctttgtattcttcatccctctgggcattatatcc
tattgttatctgtgcatgttcctggccatccgcagtgcaagcagagatattgagaagttg
gggtatcaggtgaggaagtcaaccctgatccaccagcagtccatcaagactgaatggaag
ctggccaaaattgcctctgtggtcatcatagtgtttgtgctttcctggtcgccctatgca
tgtgtcaccctcatcgcctgggctggatatgcaagcctcctcactccctattcaaaagct
gtgcctgctgttatagccaaggcatcagccatctacaacccttttatctacgccatcatt
cactctaaatacagggacaccatggcagaacatgttccctgtcttcacttcctaggacag
ccccccaggaagaagtgcatatcagtgtcacacagcgagtcctccctcagggacttgatg
ctgagcagacagtcgtctggctccaaaaccaggttccacagagtctcctccatgtctacg
gtcgacacacaggtttggagtgatgtggagctggaccctattgatgagggctatagtcgg
aagtccagctattcccttggagctttgagggacaaagatccaaagtcattggctaaccat
tccaagggaaagggaagccacagccaggaacagatccatatcccaaagagagtctcatcc
aacagatgtgatcacaccctatcgctggagtctgtcaacacaataatgcacctggccatt
gggaggagaatggaggagaatcctgaacgtttgaataaagacaagaaccaggaagcagaa
caagataaagacaatgggcaagaacagactcaacaagatcagaaggagaacgatgagaag
gagctggaagtcctcctccaggcagactctctggacaatatcgcgtctgtgcactcccaa
gcagtcatcagactcgacctaaagaaaaggccctctagaccctggctattgtga
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