KEGG   Notothenia coriiceps (black rockcod): 104950680
Entry
104950680         CDS       T04920                                 
Name
(RefSeq) melanopsin-B-like isoform X1
  KO
K04255  r-opsin
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ncc04030]
    104950680
G protein-coupled receptors [BR:ncc04030]
 Rhodopsin family
  Vision
   Opsin
    104950680
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx 7TM_GPCR_Srx 7tm_4 CIS_tube
Other DBs
NCBI-GeneID: 104950680
NCBI-ProteinID: XP_010775534
UniProt: A0A6I9NCR7
LinkDB
Position
Unknown
AA seq 517 aa
MDLDPGFYRPVHVQAHAHYIVAFFVLVIGTLGVTGNALVMYAFLCNKKLRTPPNFFIMNL
AVSDFLMAITQSPIFFVNSLYKGWIFGETGCKIYAFCGALFGITSMINLLAISLDRYIVI
TKPLQAIRWTSKRRTCLIIALVWLYSLAWSLAPLLGWSSYIPEGLMTSCTWDYVTSTPAN
KSYTLMLCCFVFFIPLGIISYCYLCMFLAIRSASRDIEKLGYQVRKSTLIHQQSIKTEWK
LAKIASVVIIVFVLSWSPYACVTLIAWAGYASLLTPYSKAVPAVIAKASAIYNPFIYAII
HSKYRDTMAEHVPCLHFLGQPPRKKCISVSHSESSLRDLMLSRQSSGSKTRFHRVSSMST
VDTQVWSDVELDPIDEGYSRKSSYSLGALRDKDPKSLANHSKGKGSHSQEQIHIPKRVSS
NRCDHTLSLESVNTIMHLAIGRRMEENPERLNKDKNQEAEQDKDNGQEQTQQDQKENDEK
ELEVLLQADSLDNIASVHSQAVIRLDLKKRPSRPWLL
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggacctggatcccggattctatcggccggtgcatgtccaggctcatgctcattatatc
gttgccttctttgtcttggtgattggaacattgggcgttacaggaaacgccttggtcatg
tacgccttcctctgtaacaaaaagttacggactcctcccaactttttcatcatgaacctg
gcagtcagtgacttcctcatggccatcacgcagtcacccatcttctttgtgaactccctc
tacaagggctggatttttggtgaaacaggctgtaagatttacgccttctgtggagctttg
tttggaataacttccatgataaacctcctggccatctctcttgatcgctacattgtgatc
accaagcctctgcaggccattcgctggacctcaaagagacgcacctgcctcattatcgcc
ctggtctggctgtactctctggcctggagcctcgcaccccttttagggtggagttcgtac
atacccgagggcctgatgacctcatgcacatgggactatgtgacatctactcctgccaat
aaaagctatactttgatgctatgctgctttgtattcttcatccctctgggcattatatcc
tattgttatctgtgcatgttcctggccatccgcagtgcaagcagagatattgagaagttg
gggtatcaggtgaggaagtcaaccctgatccaccagcagtccatcaagactgaatggaag
ctggccaaaattgcctctgtggtcatcatagtgtttgtgctttcctggtcgccctatgca
tgtgtcaccctcatcgcctgggctggatatgcaagcctcctcactccctattcaaaagct
gtgcctgctgttatagccaaggcatcagccatctacaacccttttatctacgccatcatt
cactctaaatacagggacaccatggcagaacatgttccctgtcttcacttcctaggacag
ccccccaggaagaagtgcatatcagtgtcacacagcgagtcctccctcagggacttgatg
ctgagcagacagtcgtctggctccaaaaccaggttccacagagtctcctccatgtctacg
gtcgacacacaggtttggagtgatgtggagctggaccctattgatgagggctatagtcgg
aagtccagctattcccttggagctttgagggacaaagatccaaagtcattggctaaccat
tccaagggaaagggaagccacagccaggaacagatccatatcccaaagagagtctcatcc
aacagatgtgatcacaccctatcgctggagtctgtcaacacaataatgcacctggccatt
gggaggagaatggaggagaatcctgaacgtttgaataaagacaagaaccaggaagcagaa
caagataaagacaatgggcaagaacagactcaacaagatcagaaggagaacgatgagaag
gagctggaagtcctcctccaggcagactctctggacaatatcgcgtctgtgcactcccaa
gcagtcatcagactcgacctaaagaaaaggccctctagaccctggctattgtga

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