Notothenia coriiceps (black rockcod): 104950776
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Entry
104950776 CDS
T04920
Symbol
spty2d1
Name
(RefSeq) protein SPT2 homolog
KO
K15193
protein SPT2
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncc03021
]
104950776 (spty2d1)
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104950776 (spty2d1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPT2
Cytadhesin_P30
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
104950776
NCBI-ProteinID:
XP_010775636
UniProt:
A0A6I9NMC6
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MKSDRKARAMASRTKDNFRGYNGVPVVELPKKRRTKQEMQEERALNGEGFTNNSIDPEDE
DNYEYEPSDSESEQEPEPRRPAKTPGFSASSRSSSSKQSSKKPAPPPLNFAELLKLAEKK
QFEPVEVKKVVKKEDRLRTAEEIRERELERKVKRMDRDSKTERDRDSKSQSSSSKMRKNT
SEKEQKNGKPQNNSSVKPSLPCGSAKKLHPTSSSDKGHSSSRPSVNDRDRDQSKMSNSVR
DRSKMSNSERDRSKMSNSDRDRSKMSNSDRDRSKAASSSASGATNSKVPSKGSSSQVSAK
QGGLKPSSSHKSSASSDLIPKKESSSRPSGIPGTRAPGPSTSGQRSQQGSSQQNRPNQGV
KQGPSAGGNKSGKGEPLRPGTNSAGKSSGNSGMRPSSGGPPKAGAQPQSRPGGTFHAKAL
GVPQARPGGSGPNGPPRGGGPRPPGTGPARTGSGGPVSGRPSGSVGSGPGKSTCTVVSET
ISSKNFGGPKPGVPPQPGMQQRPGMQQRPGMQQRPGMQQGPGMQQRPGMQQRPGMQQRPG
MQQGPGMQQRPGMQQRPGMNRPPVPRLPPITSAYKRKYEDDEDEYDSEMEDFIDEGEDEQ
DISRHIREIFGYDKNKYKADESDYALKFMESSWKDMQKEEARTLRMAVKEDQEEEERELQ
ELKRQTAKRKKN
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggaccgtaaagcccgggccatggcttccagaaccaaagacaatttcagaggc
tacaatggcgtcccagttgtagaattgcctaagaaaaggagaacaaaacaagaaatgcag
gaagaaagagcattgaatggcgaaggatttacgaacaactccattgacccagaggatgag
gataattatgagtatgagccttcagattcagagtcggagcaggagccagaaccacggaga
cctgcaaaaacccctggatttagtgctagtagcaggagcagtagtagcaagcaatcctct
aaaaagcctgctccacctccattgaactttgcagagttactcaaattggcagagaagaag
cagtttgagccagttgaggtaaaaaaggtagtgaaaaaagaagataggctccgaacagct
gaagagataagggagcgggagctggagcgcaaggttaagagaatggacagagactcaaag
acagagagagacagagacagcaagtctcaatctagctctagtaaaatgaggaaaaacact
tctgagaaggagcagaagaatggtaaaccccaaaataactcctcagtaaagccaagtttg
ccctgtggctcagcgaagaaattgcatcccacatcttctagtgataaaggccactcttct
tctaggccctctgttaatgacagagacagagatcaatccaagatgtctaacagtgtcaga
gatcgatccaagatgtctaacagtgaaagagatcgatccaagatgtctaacagtgataga
gaccgatccaagatgtctaacagtgatcgagaccgatccaaggcagcctcatcaagtgct
tctggtgccacaaacagtaaagttccttcaaaaggctcatcatctcaggtttcagccaaa
caaggggggctcaagccctcatccagccacaaatcaagtgcctcaagtgaccttatcccc
aaaaaagaaagctcatcaagaccctcaggcattcctgggaccagggctcctggtccatct
acatcaggccaaagatctcaacaggggagctcccaacagaacaggcccaatcagggtgtg
aagcaaggaccttcagccggaggaaacaagtctggaaagggagaacctctgaggcctgga
actaattctgctggaaagtcaagtggtaattcagggatgagaccttcttcggggggccct
cctaaggcaggggcccagccccagtcaaggcctggaggcacattccatgcaaaagctctt
ggtgtcccacaggccaggcctggtgggagtggcccaaatggtccccctagaggaggtgga
ccccgaccgccagggacggggcctgctcggactggcagtggaggaccagtatctggacgg
ccctcgggcagcgttggatctggccctggaaaatccacgtgcactgtggtgtccgagacc
atttcatccaagaattttggtgggccaaaaccaggagtccctcctcaaccaggcatgcag
cagagaccaggcatgcagcagagacccggcatgcagcagagacccggcatgcagcaggga
cccgggatgcagcagagacccggcatgcagcagagacccggcatgcagcagagaccaggg
atgcaacagggacccgggatgcaacagagaccaggcatgcaacagagacccgggatgaac
agaccaccagtcccaaggttaccgccaatcacctctgcatacaagaggaaatacgaggat
gacgaggacgagtatgactcagaaatggaggattttattgacgagggagaagacgaacaa
gacatttccaggcatattagggaaatctttggatatgataaaaacaaatacaaggcggac
gagagtgactatgcacttaaattcatggaaagcagctggaaagatatgcagaaagaggag
gccaggaccctgcgaatggccgtgaaggaagatcaggaggaggaggaaagagaactacaa
gagctgaaaaggcaaactgccaagaggaaaaaaaactga
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