Notothenia coriiceps (black rockcod): 104950806
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Entry
104950806 CDS
T04920
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-like
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104950806
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104950806
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104950806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Trypan_PARP
zf-RING_UBOX
zf-RING_16
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
104950806
NCBI-ProteinID:
XP_010775683
UniProt:
A0A6I9NKU6
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MSLSGEVTQDELLSRLQQIKDGPEQPNSTPSAPSTESGVDPVEPPENSEDPANGDSLLDW
LNTVRRTGNTTRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESP
HESPQETPQATSEETPESEEMVANVEPLVVEAEPQVPMETDVVEEPVVEEVAVIVEPELE
LEPEPEPELEPEPEPELEPEPEQEPEPEPEQEPELEQELEQEPEPEQEPEPEPEPELEEV
VSQEILGEPLLSTAALPVQPPQPPLSPSPRRGQRRARSRSPEPRRTRARTARSRSPLNLD
RLDGLPNPRHAHSTQGLNPATNAPPVLQVEGSSRTRQHVLSRQSTADVDVQPSRASAEVV
PEAQPVGAQEGEAAAGEGAAAGEGAAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRS
RSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSM
IRQIMTGFGELGYLMDSDSDSSDSNRGATTPADLAEALNNPEANPAAAPVADVEEPPVAA
GVRARTAETDTEEGVVTAPPASAGRVRPLPPISLAEPSSLPFLRLAHFFLLNDDDEDQPQ
GLTIEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENST
CPICRSAVLVSANRESVV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttcaggagaggtaacacaggacgaacttttaagtagacttcagcaaatcaag
gatggtccagagcagccgaatagcacccctagtgcccccagtactgaaagtggagtggat
ccagttgaaccaccagaaaactcggaggatcctgcaaatggggatagtctcttagactgg
ctgaacacagtgaggcgcacaggcaacacaaccagaactggtcatcgtggaaaccagtca
tggcgggccgtgagccagaccaacccaaacagtggtgatttccgcttcagcctggaaatc
agtgtgaaccgcaacctggctgaacagcaggcagctgctgaaggggagcaggaatctcca
cacgaatctccacaggaaaccccgcaggcaacttcagaagaaaccccagagagtgaagaa
atggtggctaatgttgaaccacttgtggtggaggctgaaccacaggtacccatggagacg
gacgtggtggaagaaccggttgtagaggaagtggctgtgatagttgagccggagctggag
ctggagccggagccggagccggagctggagccggagccggagccggagctggagccggag
ccggaacaggaaccagagccggagccggagcaggaaccagagctggagcaggaactggag
caggaacctgaaccagagcaggaaccagaacctgaaccagagcctgaactagaagaagtt
gtttcacaagagattttaggagaacctctcctctcaactgccgccctgccggtacaacca
ccacaacccccactctctccttctccacgcagaggacaacggagagcccgcagccgtagt
ccagaaccccgcaggaccagggcacgcacggccaggagccgctcccctctcaacctggat
cgcctggatggcctcccgaatccacgtcatgctcacagcactcaaggcctcaaccctgcc
accaatgctccccctgtgcttcaggtggagggcagttcacggactcgacaacacgttctt
tctaggcaaagcactgctgacgttgatgttcagccatctagggctagtgcagaagtggtc
ccagaggcccaacctgtaggagctcaggaaggagaagctgctgcaggggaaggggccgcc
gcaggggaaggggccgcagcagggcgccgtccccctaccattatgcttgatctccaggtg
cgtcgtgtgcgtccaggcgaatatcggcaaagagacagcattgctagccgcacccgatca
cgctcccagaactcaaacaacacatttctttatgagagtgagcgtggtggatttcgcagg
actttctcacgctctgagcgtgctggggtgaggacctacgtcagcactattcgcatccct
atccgaagaatctctgatgcaggtttgggggaggccacctcgatggctctccaatctatg
attaggcaaataatgactggttttggtgaactcggctacctcatggactcagactccgat
tcgtcagattcaaaccgtggagccaccacacctgcggatctggctgaagccctcaacaac
ccagaagccaatcctgctgcggctcctgttgctgatgtggaagaaccccctgtagctgca
ggagtcagagcaaggacagctgagactgatactgaggagggtgttgtcactgctccccct
gcctcagctggcagggttagaccactaccacctatcagcctagcggagcccagctcattg
cctttcttgcgacttgctcacttctttcttctaaatgatgacgatgaggaccagccccaa
gggctgaccatagagcagattgacaacctctcaatgcgcaattttggtgagagtgatgcc
ctgaagacttgcagtgtctgcataacagaatatgcagaaggtaacaagctacgtaagctg
ccctgctctcatgagtaccatgtgcactgcattgatcgctggctatccgaaaactccact
tgccccatctgccgcagtgctgtcttggtgtcagccaacagagagagtgttgtgtag
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