Notothenia coriiceps (black rockcod): 104951047
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Entry
104951047 CDS
T04920
Name
(RefSeq) neurexin-1a-like
KO
K07377
neurexin
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104951047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104951047
Membrane trafficking [BR:
ncc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
104951047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
104951047
NCBI-ProteinID:
XP_010775987
UniProt:
A0A6I9NHH2
LinkDB
All DBs
Position
Unknown
AA seq
1433 aa
AA seq
DB search
MSVMAVCVWAAAPLLFLGLCLCSVGGQAHGEALEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGHWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTYIGGVTPELHSSPLRLTSPSVREHPP
FRGWITGVSINGTQSTLESSGGVTVTAGCGPDHQCQNGGVCSVVNDQAVCDCSDTGFQGN
DCSEGLAHLMIGDQAREDYVATFKGSEFFCYDLSPNPIQSSSDEITLSFKTLQRNGLMLH
TGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNSWHDVKVTRNLRQHSGIG
HAMVNKLHCSVVYKNNDVRLELSKLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESF
VALSKWSAKKAGSISFDFRTTEPNGLMLFSHGKPRQQERKDPRTPPTLKVDFFAIEMLDG
HLYLLLDMGSGTTKTRAMDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILD
LDETLYLGGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGV
KPSCSREQPKQCMSNPCQHNGICREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMK
VQLPVAMHTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRIN
CTASKGPETIFAGLGLNDNEWHTVRVVRRGKGLKLTVDDLQPVEGQMAGDHTQLEFHNVE
TGIVTEKRFMPAVPSNFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVT
FRSRSSFVTLPTLQAYYSMHVFMQFKTTSPDGLVLYNRGDGNDFIVIELVKGYLHYISDL
GNGAHLIKGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYI
GGVSKEMYRELPKLVHSREGFQGCLATVDLNGRLPDLLADALATIGQVERGCEGPSTTCQ
EDSCSNQGVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGVVVYTWPPNERPSTR
ADRLALGFSTQQKHATLLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKFVN
DGKYHIIRFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDDWLLD
KGRQLTIFNSQTTVRVGGGGGERNAGMFQGQLSGLYYNGLRILNMAAEGHPHIKVDGSAR
LVGDMPSSSITPQSSAAAGGNRSDSAPSISDITTTTATNKKQGATQQSADDLLVASAECP
SDDEDIDPCDPSSARPPLPDGKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMY
KYRNRDEGSYHVDESRNYISNSATQPNGSAKDKPLGIAKISKNKKNKDKEYYV
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcatggcggtgtgtgtgtgggcggcagcccccctgctcttcctggggctgtgc
ctgtgcagcgtggggggccaggcccatggggaagccctggagtttggaggagtgtccagc
cagtgggggcggtttccggtgtggaacgcctgctgcgagagtgtgctgagcttcagcctg
cggactcacagccaggagggcctgctgctctacctggatgatgagggtttctgtgacttt
cttgaactgttgcttctccacggccacctccgcctgcgcttctcaatcttctgtgctgag
ccagcagaactgcaatcaggtgtggctgtgagtgatgggcactggcacgcagtgcgtgtc
aagagggactggaggaacacctctttggaggtggacggacgactggagggttgggcggaa
gtgaagagcaagagaagagacatgaccgtattcagccacacctacataggcggggtgacg
ccagagctacactcctcgccgctgcgcctcacatccccttcggtacgggaacaccccccc
tttcgtggctggatcacgggggtgagcatcaacggcacacaatcgacgttggagagctca
gggggcgtcacagtaacagctggctgtgggccggaccaccagtgccagaacggaggggtg
tgcagcgtggtcaacgaccaggccgtttgtgactgctccgacaccggtttccaagggaac
gactgcagcgaaggtctggcacacctgatgattggcgaccaagctcgagaggattacgtt
gcaaccttcaagggctccgagttcttctgctacgacctttcacccaaccccatccagtcg
agcagcgatgaaatcacgctttccttcaagactctgcagcgcaacggcctgatgctgcac
accggcaagtcggccgactacgtcaacctagctctgaagaacggggccgtgtcactcgtc
atcaacctaggctccggggccttcgaggccttggtggagcccgtcaacggcaagttcaac
gacaactcctggcacgacgtcaaggtcacccgcaacctgagacagcactcaggcattgga
cacgctatggtaaacaaactccattgttcggtggtgtacaagaacaacgacgtacggttg
gagctgtcgaaactggctaaacagggagacccaaagatgaaggttagtggggtggtgtcc
tttaagtgtgagagtgtggctacgctggaccccgtaacctttgacacccctgagtctttc
gtggcactgagcaagtggtcagcgaagaaggcgggatccatctcgttcgacttcaggacc
acagagccaaacgggttgatgcttttcagccacggcaaaccccgacagcaggaacgcaag
gacccacgcacgcctcctacactcaaggtggattttttcgccattgaaatgctggacggg
cacttgtacttactgctggacatgggctcaggaaccaccaagaccagggcaatggacaga
aaggtcaacgacggagagtggtatcatgtggacttccagagggacggacgctcaggaacc
atctcggtgaacagtgtgaggacagcgtacacggccccgggagacagtgagatcttggat
ctggacgagactttgtacctcggggggctacctgaagaccgcgctggactcatcttccct
acagaggtgtggacggctctgttgaactacggttacgtgggctgcatcagagatctgttt
gtggacgggcagagtaaagacatccggaggttggccgaggcccagagggcggtgggggtg
aagccctcgtgctccagagagcagcccaaacagtgcatgtccaacccctgtcagcacaac
ggcatctgcagggagggctggaaccgctacgtgtgcgactgctccgggacggggtacctg
ggacgctcctgcgagagagatgcgaccatcctgtcgtacgacggcagtaagtttatgaag
gtgcagttgcccgtggcgatgcacaccgaggcggaggacgtctcgctacgctttcgctcc
cagcgggcctacggggttctcatggcaaccacatcccgtaactccgcagacacccttcgt
ctggagctggatgggggccgtgtccgactcactgtcaacctagactgtatcaggataaac
tgtacagccagtaaaggtccagagaccatctttgcgggcttgggcctcaatgataatgag
tggcacacggtgagagtagtccggcgtggcaagggcctgaaactcaccgtagacgacctg
cagcctgtcgaaggtcagatggcgggcgaccacacccagttggagttccacaatgtggag
acgggtattgtgacggagaagcgcttcatgcctgccgtgccttccaatttcatcggccac
cttcagggcctgacactgaacggcatgccctacattgacctgtgcaagaacggcgacatc
gactactgcgagctcaacgctgttattggctataagagcatcgtggctgaccccgtcacc
ttccgctcccgctccagcttcgtcacgttgcccacgctgcaggcctactactccatgcac
gtcttcatgcagttcaagaccacgtcccccgacggcctggttctctacaacaggggagac
ggcaacgacttcattgtgatagagctagttaaaggctacctacactacatttctgacctg
ggcaatggagcacacctgatcaagggcaactctaacagtcctctaaatgataaccattgg
cacaacgtacacatctccagagacactaacaatctccacacggtcaagattgacaccaaa
gtcaccacgcagaccaccatgggcgccaagaacctcgacttaaagggtgacctgtacatc
gggggcgtctccaaagagatgtaccgagaactgccgaagctggtccactcccgtgagggc
ttccaaggttgtctagcaacagttgatctaaatggccgactccctgatcttttggctgat
gcacttgcaaccattggacaagtggagagaggctgtgaaggtcccagcactacatgtcaa
gaagactcttgttcaaatcagggagtttgtttgcagcagtgggagggcttcacctgcgac
tgcagcatgacgtcgtatgctgggccgctatgcaatgatgctgggaccacttatatcttt
ggccgtgatggaggagtggtggtttacacgtggccccctaatgagcgtcccagcaccaga
gcagaccgcctggccctggggttcagcacacaacagaaacacgccactctgctgcgggtt
gacagcgcgtctggtctcggagactaccttcagctgcagatagacaaaggcaacattaga
gtagtgtttaatgtcggcactgatgatatcaacatcgaggagagctccaagtttgtcaac
gatggaaagtatcacataattcgattcactcgcagcggaggcaatgcaacccttcaactg
gacgacctgccagtcatcgaacgctatccctcaggcaacattgataacgagcgcctggcc
atcgccagacagcgaatcccctatcggctcggtcgagtagttgacgattggctactcgac
aaaggtcgccagctgaccatcttcaacagccagacgacggtgcgtgtaggtggaggtgga
ggagagcgcaatgcaggcatgttccagggtcagctttccggactttactacaacggcctc
cgcatcctcaacatggccgccgaggggcacccgcacatcaaggtggacggcagcgcgcgg
ctggtcggagacatgccgtcctcctccatcacgccgcagtccagtgctgcagctggaggg
aaccgctctgactccgccccctccataagtgacatcacaaccaccacagccaccaacaag
aaacagggtgccactcagcagtcggcagacgacctgctggtggcgtcagctgagtgtccc
agcgacgatgaagacattgacccctgtgaccccagttcagcccgcccccctctgccggat
gggaaggtattcccgggtccgtctgaggtggtccgggagagcagcagcaccacagggatg
gtggtgggcatcgtggcagccgcggccctctgcatactcatcctcctctacgccatgtac
aagtaccgtaaccgcgacgagggctcctatcacgtggacgaaagccgcaactacatcagc
aactcagccacacagcccaacggcagcgccaaggacaaaccgctggggatcgccaagatc
tccaagaacaagaagaacaaagacaaggagtactacgtctga
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